Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1937 ATGGAGTCAGAAGGAGAAGCTGGGGGAAAGCCTATGACAGTATTGGGTGGCCAAGTCTGCCAGATCTGCGGTGATAATGTTGGGAAGACTGTGGATGGTGAGCCATTCATTGCTTGCGATGTTTGTGCTTTTCCTGTATGCAGGCCATGCTACGAGTACGAAAGGAAGGATGGGAATCAGTCTTGCCCTCAATGTAAGACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTGTTGGAGATAGGGAAGAGGATGGTGCTGCTGCTGATGGTACTAGTGACTTCAATTATGACTCAGAAAATCAAAACCAAAAGCCAAAGATTTCAGAGCGCATGTTGAGCTGGCACATGACATATGGTCAAACAGAGGAGGTTGGAGCTCCAAAGTTCGATAAGGAAGTTCCTCACAACCACATTCCTTTGCTCAGTGGAGGACAAGAGGTCTCTGGAGAATTATCAGCTGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGGAATTGGTGGTGGGAAACGTGTCCACAATCTCACATATTCATCTGACGTTAATCAATCACCCAATATTAGGGTAGTGGATCCAGGAATGGGCAATGTAGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAACAGGAAAAGAATGTTGTTCCAATGAGCACAGGCCAGGCTGCTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGATGATTCTTTGTTGAATGATGAAGCTCGACAACCGCTTTCCAGAAAGGTTTCTATTCCATCATCTAGGATTAATCCATACCGTATGGTCATTGTTCTGCGGCTGATTATCCTCTGCATTTTCTTGCATTACCGAATAACAAATCCTGTACCCAATGCATATGCATTGTGGTTGATATCAGTCATATGTGAGATTTGGTTTGCCATATCCTGGATTTTGGATCAGTTCCCTAAATGGCTCCCTATAAACCGTGAAACATATCTTGATAGACTCGCTCTCAGGTATGATCGGGAAGGAGAACCATCACAGCTGGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCACTTGTAACTGCCAATACTGTGCTATCGATTCTTGCTGTTGATTACCCAGTTGATAAGGTCTCCTGCTATGTATCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCAGAGTTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAATATAGCATTGAACCACGGGCACCAGAGTGGTATTTTGCACTGAAAATTGACTATTTGAAGGATAAGGTTCATCCATCATTTGTCAAAGATCGTAGAGCCATGAAGAGAGAATATGAAGAATTCAAAGTTCGTATCAATGGACTTGTTGCAAAGGCACAGAAAGTTCCTGAAGAAGGATGGTTAATGCAAGATGGCACACCATGGCCTGGAAACAACACTAGAGACCATCCAGGAATGATCCAGGTGTTTTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAGCTACCACGCTTAGTCTATGTTTCTCGTGAAAAACGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTGGTTCGAGTGTCAGCTGTTCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGTTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTACGTTCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGACCTGTGTATGTGGGTACTGGATGTGTCTTCAATAGAACAGCCTTATATGGTTATGAACCCCCTCTTAAGCCCAAGCATAAGAAACTTGGCTTGTTGTCTTCAGTCTGTGGTGGGAATCGAAAGAAGAGTTCTAAATCTAGTAAGAAAGGCTCAGACAAGAAAAAATCTAGCAAGCATGTTGATCCAACTGTGCCCATCTTCAGTCTAGAAGATATAGAAGAAGGAGTTGAAGGTTCTGGATTTGATGATGAGAAGACATTACTTATGTCACAAATGAGCCTAGAGAAAAGGTTTGGTCAGTCTGCTGTTTTTGTTGCATCTACACTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACCCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGCGGTTATGAGGACAAAACAGAATGGGGAAGTGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTCACTGGATTTAAGATGCATGCCCGTGGTTGGCGGTCTGTTTACTGCATGCCCAAGCTCCCAGCATTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGATGGGCTCTAGGTTCCGTGGAAATTCTTTTAAGTAGACACTGTCCCATCTGGTACGGTTATAGTGGAAGGCTAAAATGGCTTGAGAGGTTTGCATATGTTAACACCACAATCTATCCAGTCACTTCCATTCCCCTTCTCATGTATTGTACCTTGCCTGCGGTCTGTCTCCTTACAAACAAGTTCATTATTCCACAGATTAGCAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATCTTTGCAACCGGTATCCTTGAGATGAGGTGGAGTGGCGTTGGAATTGATGAGTGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCAGCCCATCTATTTGCCGTGTTTCAAGGTTTGCTCAAAGTACTTGCTGGAATTGACACCAACTTCACTGTCACCTCCAAGGCATCAGATGAAGATGGAGACTTTGCTGAACTGTATATGTTCAAATGGACTACCCTTCTCATTCCACCCACAACTCTTCTCATCATAAACTTGGTAGGGGTCGTCGCTGGAATATCCTATGCCATTAACAGTGGTTACCAGTCGTGGGGCCCACTCTTTGGTAAGCTTTTCTTCGCATTTTGGGTGATTATCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGAAGGCAGAACCGAACACCAACCATTGTTGTGGTCTGGTCCATTCTGCTTGCATCCATTTTCTCATTGTTGTGGGTCCGAATCGACCCATTCACGACAAGAGTCACTGGCCCTGATGTTGAGCAGTGTGGAATCAACTGCTAG 3228 0.4393 MESEGEAGGKPMTVLGGQVCQICGDNVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAIVGDREEDGAAADGTSDFNYDSENQNQKPKISERMLSWHMTYGQTEEVGAPKFDKEVPHNHIPLLSGGQEVSGELSAASPERLSMASPGIGGGKRVHNLTYSSDVNQSPNIRVVDPGMGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLIILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYSIEPRAPEWYFALKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWLMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKLGLLSSVCGGNRKKSSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGSGFDDEKTLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSVYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1937 1075 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 485 638 IPR029044 -
Dere07g1937 1075 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1042 - -
Dere07g1937 1075 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Dere07g1937 1075 Pfam Cellulose synthase 347 1068 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere07g1937 1075 SUPERFAMILY RING/U-box 5 88 - -
Dere07g1937 1075 MobiDBLite consensus disorder prediction 652 679 - -
Dere07g1937 1075 FunFam Cellulose synthase 3 94 - -
Dere07g1937 1075 CDD mRING-HC-C4C4_CesA 18 68 - -
Dere07g1937 1075 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 886 IPR029044 -
Dere07g1937 1075 FunFam Cellulose synthase 464 638 - -
Dere07g1937 1075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Dere07g1937 1075 MobiDBLite consensus disorder prediction 74 106 - -
Dere07g1937 1075 MobiDBLite consensus disorder prediction 74 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1937 Dere-ChrDere07 32393538 32400543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1937 1 1075 Glycosyltransferase AT5G05170 86.989 0.0 1939