Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1934 ATGGTATCTGTCACAATTTTCGTCCTTTCCATCGTAATTCACACTCAATCAGTGTTTCGTTTCCATTGAGTCCCACCGTTCTCGCAGCCACAGAGGAAGATAGAGAGTGAGAAAATGGCGGATGAGAAGAAGATTCACGGCGACAGCGAAGCAGCTGGAAATAGGATAGTGAAGGTGGACCCTAAACCTAACAATGGGTTTAGTTCCAAAGCCATCGATCTTTTAGAGAAGCTGGTGGTGAGGTTGATGTATGATTCTTCGAAGCCACATCACTGGCTCTTTGGTAATTTTGCTCCCGTACCTGACGAGACACCTCCCACTATGCACCTCCCTTTAAAAGGTCACCTTCCGGATTGCTTAAATGGAGAGTTTGTCAGGGTGGGACCTAATCCTAAGTTTGCTCCTGTGGCTGGATATCACTGGTTTGATGGAGATGGAATGATCCATGGCTTGCGTATCAAAGATGGAAAAGCCATGTATGTTTCCCGATTTGTGAAAACATCTCGTCTTAAACAAGAAGAATACTTTCAAGGTGCTAAATTTATGAAGATTGGAGATCTTAAAGGTCTGTTTGGACTTTTAATGGTTAACATGCAAATGCTAAGAGCTAAACTGAAAGTATTGGATGTTTCTTATGGAAATGGAACAGCTAATACAGCTCTTGTATATCACCATGGGAAGCTTCTAGCACTCTCTGAAGCAGATAAACCTTATGTTATTAAAGTTTTTGAAGATGGGGATTTGCAAACTCTTGGCCTGCTGGACTATGACAAGAGATTGAACCATTCCTTTACCGCTCATCCAAAAGTTGACCCATTTACTGGGGAGATGTTTACATTTGGTTATTCACATACGCCCCCGTATATAACTTACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCTATAACAATATCAGAGCCTATCATGATGCATGACTTTGCCATCACAGAGAATTATGCGATATTTATGGATCTTCCTTTGTATTTTAGGCCAAAGGAAATGGTGAAGGAAAAGAAATTGATATTCTCATTTGATTCAACCAAAAAAGCTCGTTTTGGTGTACTGCCTCGATATGCCAAGAATGAGCTGCAAATTAGATGGTTTGAGCTTCCAAACTGCTTCATATTTCACAATGCCAATGCTTGGGAGGAGGAAGATGTAGTTGTTTTGATTACCTGCCGCCTTGAGAACCCAGATTTGGACATGGTTGGTGGAGCTGTCAAGGAAAAGCTTGATAATTTCGCTAATGAGCTATATGAAATGAGATTTAACATGAAAACTGGTGAAGCTTCACAGAAGAAATTATCAGCATCTGCTGTAGATTTTCCTCGGGTAAATGAAAGCTACACTGGCAGGAAGCAGCGATATGTTTATGGAACCATATTAGACAGAATTGCAAAGGTCACAGGGATTATCAAATTTGATTTGCATGCTGAGCCAGATTCGGGTAAAACAAAGCTTGAAGTTGGAGGAAACATTCAGGGTATCTATGACTTGGGACCGGGGAGATTTGGTTCTGAAGCTATTTATGTACCTCGTGTGCCTGGCATCAATTCCGAAGAAGATGATGGATACTTGATATTTTTTGTGCATGACGAGAATACAGGAACGTCGGCAGTGCATGTCATTGATGCAAAAACAATGTCATCTGATCCTGTTGCAGTTGTTGAACTGCCACATAGAGTCCCTTATGGTTTCCATGCCTTCTTTGTGACAGAGGAACAACTGCAAGAACAGGCGAAACTCTAA 1761 0.4123 MVSVTIFVLSIVIHTQSVFRFHXVPPFSQPQRKIESEKMADEKKIHGDSEAAGNRIVKVDPKPNNGFSSKAIDLLEKLVVRLMYDSSKPHHWLFGNFAPVPDETPPTMHLPLKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKAMYVSRFVKTSRLKQEEYFQGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYVIKVFEDGDLQTLGLLDYDKRLNHSFTAHPKVDPFTGEMFTFGYSHTPPYITYRVISKDGYMHDPVPITISEPIMMHDFAITENYAIFMDLPLYFRPKEMVKEKKLIFSFDSTKKARFGVLPRYAKNELQIRWFELPNCFIFHNANAWEEEDVVVLITCRLENPDLDMVGGAVKEKLDNFANELYEMRFNMKTGEASQKKLSASAVDFPRVNESYTGRKQRYVYGTILDRIAKVTGIIKFDLHAEPDSGKTKLEVGGNIQGIYDLGPGRFGSEAIYVPRVPGINSEEDDGYLIFFVHDENTGTSAVHVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTEEQLQEQAKL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1934 586 PANTHER BETA-CAROTENE DIOXYGENASE 91 577 IPR004294 GO:0016702
Dere07g1934 586 Pfam Retinal pigment epithelial membrane protein 97 575 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1934 Dere-ChrDere07 32362227 32371155 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1934 07 32362227 32371155 Dere07g1934 07 32362227 32371155 ECH