Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1926 ATGAAGAGGTTGAGGTCCAGCGACGATCTCCATTCTTACGGAGACAAAAATGTCTGCAAGGATTCGAATCTGAATCGATCCTCGTCTTCTTCGCACCGGAGCTTTTACTACAAACCCGATAATGTACGGAAGGGATTGCTTTCTTCATCATCTTCAGCGTCTCGGTATGACAGGGATCGAACAGTGGATGAGGATCGGGACGGCTCCAGGTTGGTTCGGAAGCGATCAGACCATGATTTTGAGAGTTTTGATCGGAGAAAGGGGTTTGATCGTTACAGGGACAGTGGGGATAGTAGAGGGTATGGGCCTGGAGGGGATAGAAGTTTGATTCAGAGGTCGGAGAGTTTTTGTGGATCTCGGAGGGATTTTCCCAAGGGCTTTCGGTCTGAGAGAGACCGTTCTCGGCGGGAAGGCAGCGTGTCTTCGTGGCGGAGATTTGGTGGTGGGGTGAAGGATTTTGATGACAATGGTAGAGGGAGCAGGGTTGGACTAGACGATAGAGTGGTGCGGTCTCCGAAGGGTTTGAGGGATGTAAAATCGCCGACGTGGTCAAAAGACTCTGAGAGTGAGCAGTCTAAGATGAGGTCTTCTCCAAGAGGGTCCAGAGATGCAAAGTCAAAGTCGAAGTCACCATCATGGTCCAAGGATTCAGAAAGTGAACAATCTAAGAGTGAGCAGTCGAAGAGTGTTGAGGTGAAGAAAACTGAGGAGTTGCAGGTTGAGAGTCGGAGTAGTAGTGAAATGGAAGAGGGAGAACTGGAACCTGAACCGATGCCTGAAACAGAACCAGAAAAAGCTTCTAAAGTTGCACCTGAAAATGAAGACCAGACCTTTATTCCTGTGGACGCTGATGAAAAGGAAGTCCAGACAGAAAACCAGCTTAAGGATACAGATTCTACTATGCATGAAAGATCAGAAGAGTTAAGTAAAGAAGAGACAAGACCGAATGAGGACACAAATTCGCCGGAACAAAATGTGGAGAAAGAGGATGATAAGCTGCCAGATGTTCAGAATGATCCAACTGATAAAATGCATGATACTGAAAATGAAACTGTGACTCATGGTGATAACAAGGAAGAAGAGAGTTTGAAAGTTGATACTGAATGTAAGGAGGCAACAAAGGAAGATGCAGACCCTGAGAAGCCATTGCTTTGTGGAGAGGATCATAAGCAGGACAAGGGTGTAGATCTTGAAACCAGGGCAGACTCTGACAAACTGGAGTTAAACAAGGAAGTTTCAACGCAAGATGAAGTGCACAAAATAGATGGAGAAACAATGATGGAGATTGTGCCGAACAGTTTGAAGGATAAAGGCAAAAGTGTTTCTGTAATCTCCACTGATGTTGTTCATTCTTCAGAAGATGGTTTGTGGAATGATGGAGGATTGAGAGGTCTCACAACATGCTCCGGGGATGCTATGGAAGGTCCAAGTACAAGGGGCTTTGAGTTGTTTTCTATATCCCCTGTTAGAAAAGTGGAGAAAACTGACCAATCAAGTCTCAGCAAGCAGAAAGACGGAAGTCTTTCAATGGAGGATCTTGATCTTTCTCTTAGCTTGCCAAATGTTTTGTTACCTATTGGTGCTCGTGAGACTACTGTAGCGCCTGGATCCCCCAGTCAAGTGCATAGTGTACAGTCTTTAAGTAATACATTTCGTACCAACTCAGAAGGATTTACTGCATCAATGTCTTTTTCGGGTTCTCAATCTTTTTATCATAATCCAAGCTGTTCTCTCACACAAAATTCAATTGACTATGAACAATCTGTCGGCAGTCACCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGCCAGTCTCTGACTGATCCCAAACAGAAAGAAATTCCTCGTTGTCAAGGGACTTTGGCGAATGGAAATGGCACTTTTGGCCAGTCTCAAGCAACATGGGGCATTTTAGATGGTCAAGCTGTGAAAGGTCAGCATTCTAGGGTTCTAGAAGGGAGCTCAAAAATGGCCAGTGGACTTGACAGGCAATTGAGTTTTCAGAAGCAGTTGTCAGGACAGTCAAGGCGCCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGGTCTCATGATATTGGATCTAGTTATAGTTTTGACAAGAAGAGGGAAATGAGAGATAAGAGTAGTGGTAATGTTCATCGAACTGCAAGCCAGAAGGAACAAGAACAATTTCAGTTGGGTGGAAGTGAGTTTGTTGAGACAATCATTGCAAGAATAGTTTCTGAACCAGTGCATGCAATGTCTAAAAGATTTCATGAAATGACTGGACAGTCTGTAGCGTGTTTGAAAGAGAGCATTCGTGAGATAATGCTTAATGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTGCAGAACAGATCTGATATTACCTTGGAGGTCTTACTAAAGTCCCACCGTGTTCAATTAGAAATTTTGGTTGCTCTGAAAACTGGTTTAACTAATTTTCTTCAGCTAGACAACAGCATTTCATCTACTCATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTGTTTGTCGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGTTTTGTGTGCAGAAAAATGGCTTTTGCAGGGAATGTATGTGTCTTGTGTGTTCTAAGTTTGACAATGCATCAAATACATGTAGTTGGGCTGGGTGTGATGTTTGCTATCATTGGTGCCATACGGATTGCGGATTACGCGAATCTTATATTAGAAATGGACATAGTGCTTCTGGGGCACAAGGGGTGACTGAGATGCAATTTCACTGTATCGCCTGTGATCACCCCTCTGAGATGTTTGGTTTTGTAAAGGAGGTATTTCTAAATTTTGCAAAGGATTGGTCAGTTGAAGCTTTTTGCAAGGAGCTTGAATATGTTAAGAGAATTTTTTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGAGGTTGCTGATCAAATGCTGCTAAGGTTGGCAAATAAGTCTAACCTTCAAGAGGTTTACAGCAACATCATGTCTTTTCTTACTGATGGTGATTCCTCCAAAATAGCCATGAAACAGAATTTATCAGGGAAGGAACAAGTTAAAGAAAAGAATGCAGTAGCTGGGTCCAGCCAGGAAGCTGCCTGGATAAAATCTATATATTCAGAAAAGGCACCTCTGTTAGAAAGGTCAGCTAACATCCTTCCTAGCTATGACCGGAATGATAAGCGGACTCCAGCACAAGAGTTGCACATGAATGTTCAAAAGGACTTTTGTTTTGATGAATTGGAGAGCATAGTAAAAATAAAACAGGCAGAAGCTAAAATGTTTCAAACACGTGCTGATGATGCCAGAAGAGAAGCTGAAGGCCTGAAACGAATTGCCCTTGCTAAGAACGAGAAAATTGAAGAAGAATATGCCAGTCGACTTTCAAAGTTGCGATTGGCAGAGACTGAGGAAATGCGCAGACAAAAAGTTGAAGAACTCCAGGCGTTGGAAAGAGCGCATCTAGAATACTTCAATATGAAAGTGAGAATGGAAGCGGACATTAAAAATCTGTTATTGAAAATGGAAGCTACAAAAAGGAGCCTTGCTATGTGA 3588 0.4295 MKRLRSSDDLHSYGDKNVCKDSNLNRSSSSSHRSFYYKPDNVRKGLLSSSSSASRYDRDRTVDEDRDGSRLVRKRSDHDFESFDRRKGFDRYRDSGDSRGYGPGGDRSLIQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGVKDFDDNGRGSRVGLDDRVVRSPKGLRDVKSPTWSKDSESEQSKMRSSPRGSRDAKSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEELQVESRSSSEMEEGELEPEPMPETEPEKASKVAPENEDQTFIPVDADEKEVQTENQLKDTDSTMHERSEELSKEETRPNEDTNSPEQNVEKEDDKLPDVQNDPTDKMHDTENETVTHGDNKEEESLKVDTECKEATKEDADPEKPLLCGEDHKQDKGVDLETRADSDKLELNKEVSTQDEVHKIDGETMMEIVPNSLKDKGKSVSVISTDVVHSSEDGLWNDGGLRGLTTCSGDAMEGPSTRGFELFSISPVRKVEKTDQSSLSKQKDGSLSMEDLDLSLSLPNVLLPIGARETTVAPGSPSQVHSVQSLSNTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDYEQSVGSHPLFQGIDQVSHGGWQGQSLTDPKQKEIPRCQGTLANGNGTFGQSQATWGILDGQAVKGQHSRVLEGSSKMASGLDRQLSFQKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDKSSGNVHRTASQKEQEQFQLGGSEFVETIIARIVSEPVHAMSKRFHEMTGQSVACLKESIREIMLNADKRGQILAFQKVLQNRSDITLEVLLKSHRVQLEILVALKTGLTNFLQLDNSISSTHLAEIFLNLRCRNLVCRSQLPVDECDCKFCVQKNGFCRECMCLVCSKFDNASNTCSWAGCDVCYHWCHTDCGLRESYIRNGHSASGAQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEAFCKELEYVKRIFSASKDMRGRQLHEVADQMLLRLANKSNLQEVYSNIMSFLTDGDSSKIAMKQNLSGKEQVKEKNAVAGSSQEAAWIKSIYSEKAPLLERSANILPSYDRNDKRTPAQELHMNVQKDFCFDELESIVKIKQAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYASRLSKLRLAETEEMRRQKVEELQALERAHLEYFNMKVRMEADIKNLLLKMEATKRSLAM 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1926 1195 MobiDBLite consensus disorder prediction 279 414 - -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 882 902 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 810 825 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 756 778 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 836 857 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1129 1151 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 955 974 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1090 1110 IPR004082 -
Dere07g1926 1195 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 795 810 IPR004082 -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 88 414 - -
Dere07g1926 1195 Pfam Coiled-coil region of Oberon 1066 1183 IPR032535 -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 148 250 - -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 118 140 - -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 56 71 - -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 1 71 - -
Dere07g1926 1195 CDD PHD_OBE1_like 875 934 IPR047578 -
Dere07g1926 1195 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1193 IPR004082 -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 701 719 - -
Dere07g1926 1195 Coils Coil 1114 1134 - -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 673 730 - -
Dere07g1926 1195 Pfam PHD - plant homeodomain finger protein 845 968 IPR032881 -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 18 36 - -
Dere07g1926 1195 MobiDBLite consensus disorder prediction 1 16 - -
Dere07g1926 1195 Coils Coil 1172 1192 - -
Dere07g1926 1195 Coils Coil 1144 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1926 Dere-ChrDere07 32181150 32185627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1926 845 993 PHD Gene Family AT5G57380 26.846 6.75e-12 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1926 07 32181150 32185627 Dere07g1926 07 32181150 32185627 ECH