Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1914 ATGGTGGAACCTCGTCCTAAGCGTCCCAAAATCGCCAGGGGAGAGGATGATTATATGCCTGGAAGCATTATTGAGATTGAGCTTCTTAAGTTTATGACCTTTGATTACTTAAAATGTAAACCTGGTCCTCGTTTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGCTCTCTTGTATGTGCCATTGCACTTGGCCTTGGTGGTGAGCCTCAGCTGCTAGGGCGAGCAACAAGTATTGGATCATATGTGAAGCGGGGAGAAGAGTCAGGTTACATTAAGATTACGTTGAGAGGCGATAGTGAAGAGGAGCATATCATTGTTATTCGGAAAATAAATACTAACAACAAGTCTGAATGGTTGTTCAATGGCAAAGTAGTGGCCAAAAGGGATGTGACTGAAGTCATTCAAAGGTTTAACATCCAAGTTAACAATTTGACTCAATTTTTACCCCAAGACAGGGTCTGTGAATTTGCCAAATTAACTCCTGTGCAACTTCTGGAAGAGACTGAGAAGGCTGTTGGTGATCCCCAGCTTCCCATCCTTCACCATGCGCTTGTTGAAAAAAGCCGTGCATTGAAGCAAATTGAGCTGACTCTGGAGAAAAATGAAGAAACTTTAAAACAGCTGAAGGACCTTAATGCTGAACTTGAGAAGGATGTTGAGCGTGTTCGTCAAAGGGATGAACTACTTAAAAAGGCTGAGTCCATGAAAAAGAAAGTGCCATGGCTTAGATATGATATGAAGAAGGCTGAATATTTGGAAGCTAAAGAACAGGAAAATGGTGCTAAAAGGAAGATGGAGGAAGCTGCGAAGATTTTAAATGATCTTAGAAAACCTATCGAGAAACAAAAAAAGGACAAGGCTGCATTGGATGCAAAATGTAAAAAAATTTCCAGCCTTATAAATGAGAACACCAAGAAGCGAATGGAACTTCTGGAGAAAGAAAACCATCTGGGTGTGGAATTACAAGGAAAATACAATGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGTCAACAAAGATTGTTAAAAGCTAAGGAGGAACTTGCTGCTGCTGAATTTGAACTAGAGAATCTGCCTCATTATGAACCTCCAAAAGAAGAGATTGAAAGACTAAAAGATGAAATTTTGAACTTACACAATTCTGCAACTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAATATTTAAATCAGAGAAGGTCATCATTGGCACAGTGTATGGAAAGGCTGAGGGAGATGGATAGTAAAAATACTAAATGTTTGCATGCATTACGAGATTCTGGGGCTGAGAAGATAATTGAAGCTTATAAATGGGTGCAAGAGCATCGCCATTTATTTAATAAGGATGTTTATGGTCCTGTATTGCTGGAGGTTAATGTCTCAAAGCAGACACATGCTGGCTTCCTGGAGGGTCATGTTCCTCATTACATCTGGAAGTCTTTCATAACTCAAGATTCTGGTGATCGGGACCTTTTGGTGAAAAACCTGAACTCCTTTGATGTTCCGGTTTTAAATTATACTGGCAATGATAGTAGTGAAAGAGAGACTTTTCAAATTTCTGAAGATATGCGTACTCTTGGCATCTACTCTCGACTTGATGAAGTTTTTGATGCTCCCATGGCTGTTAAGGAGGTTTTGACCGGGCAGTTTGGTCTGGATCATTCATATATTGGGACCAGAGAAACTGATCAGAAGGCTGATATGGTCCAAAGATTGGGCATTTTTGACTTTTGGACTCCTGATAATCACTATCGTTGGTCTAAGTCTAGATATGGGAATCATGTATCTGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCATATAATATGGACGTGAGAGAAATTGAGAAGCTGAGGTCTCACAAAATGGATCTTGAAGAGTCTATAGCAACCTTGGAGGCAACTTCTAAAAGGTTACAAGAAGAGGAGAGACACCTAAACAATGAAGCAGCTATTCTTCGCCGACAACGGGAGGAAATAAATAATACTGTGCTCAAAGAGAAAGAAAAACGCCGTGACATCTTGCGCTCTATTGAACAAAGGAAAAGGAAATTAGAATCAATGGAGAAGGAGGGTGACGTGGATATGGTTATGGCAAAACTCATTGATGAAGCAAGAAATTGTTATATTCAGCGATTCCGCAATGCAATCAAAATTAAGAACCTACTTGTTGGGGCCACTAGTTATAGAAGGAGTTTTGCTGAAGAACATATGGCAGTCCTTGACTTTGATGCTAAGATTAGAGAGTTGGAGGCCAGTTTGAAGCAGCATGAGAAGCTTGGTTTGCAAGCATCATTGCACTTTGAGAACTGTAAGAAGGAGACTGAGAATTGTCGACATCAGCTTTCAGAATATTTGAGGCATGCTGAATCAATTGCTCCAATCACTCCAGATCTTGAGAAGGAGTTTCTTGAGATGCCCACTACTATTGAGGAATTGGAAGCTGCTATCCAGGACACGACTTCTCAAGCCAATTCTATACTTTTTGTTAATCATAATGTGTTGGAACAATATGAGAACCGTGAATGTCAGATAGAAACTTTAGCCACAAATCTTGAAGAAGGTAAGAAGGAAGTAAGGAGGTCTGTAGCTGAAGTAGAAACCCTGAAGGGGACATGGCTTCCAACATTGAGGAACCTGGTGGCCCAGATAAATGAGACTTTCAGTCGTAATTTCCAAGAGATGGCTGTTGCCGGAGAAGTTTCACTAGATGAGCGTGATATGGACTTTGATCAGTTTGGGATACTCATAAAAGTAAAGTTCAGACCTACAGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGGTCAGTTTCAACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACAAACTGCCCATTCAGAGTGGTTGATGAGATTAATCAAGGCATGGACCCAATAAACGAAAGAAAGATGTTCCAGCAATTAGTGAGAGCTGCCAGCCAGCCTAATACACCACAGTGTTTCTTGCTCACCCCGAAGTTGCTACCAGATCTGGAATACAGCGAAGTTTGCAGCATATTAAATGTAATGAATGGGCCTTGGATTGAGCAGCCCTCAAAAGTTTGGAGTAGTGGTGATCGATGGGGAAAAATAGGGGGTTTGGTGTTAGAGAATCAACACTGA 3156 0.4094 MVEPRPKRPKIARGEDDYMPGSIIEIELLKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEESGYIKITLRGDSEEEHIIVIRKINTNNKSEWLFNGKVVAKRDVTEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHHALVEKSRALKQIELTLEKNEETLKQLKDLNAELEKDVERVRQRDELLKKAESMKKKVPWLRYDMKKAEYLEAKEQENGAKRKMEEAAKILNDLRKPIEKQKKDKAALDAKCKKISSLINENTKKRMELLEKENHLGVELQGKYNEMEDLRRQEETRQQRLLKAKEELAAAEFELENLPHYEPPKEEIERLKDEILNLHNSATQKRLEKSETDKYLNQRRSSLAQCMERLREMDSKNTKCLHALRDSGAEKIIEAYKWVQEHRHLFNKDVYGPVLLEVNVSKQTHAGFLEGHVPHYIWKSFITQDSGDRDLLVKNLNSFDVPVLNYTGNDSSERETFQISEDMRTLGIYSRLDEVFDAPMAVKEVLTGQFGLDHSYIGTRETDQKADMVQRLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNMDVREIEKLRSHKMDLEESIATLEATSKRLQEEERHLNNEAAILRRQREEINNTVLKEKEKRRDILRSIEQRKRKLESMEKEGDVDMVMAKLIDEARNCYIQRFRNAIKIKNLLVGATSYRRSFAEEHMAVLDFDAKIRELEASLKQHEKLGLQASLHFENCKKETENCRHQLSEYLRHAESIAPITPDLEKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNVLEQYENRECQIETLATNLEEGKKEVRRSVAEVETLKGTWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDERDMDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEQPSKVWSSGDRWGKIGGLVLENQH 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1914 1051 Pfam RecF/RecN/SMC N terminal domain 23 991 IPR003395 -
Dere07g1914 1051 Coils Coil 843 863 - -
Dere07g1914 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
Dere07g1914 1051 Coils Coil 330 350 - -
Dere07g1914 1051 Coils Coil 371 391 - -
Dere07g1914 1051 Coils Coil 745 765 - -
Dere07g1914 1051 Gene3D - 847 1009 IPR027417 -
Dere07g1914 1051 Coils Coil 620 696 - -
Dere07g1914 1051 Coils Coil 186 234 - -
Dere07g1914 1051 Gene3D - 22 225 IPR027417 -
Dere07g1914 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Dere07g1914 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 5 1044 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1914 1 1042 Structural Maintenance of Chromosomes family AT5G15920 64.395 0.0 1375