Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1908 ATGTCCAAAGAAAGTTTCAGTGTTCTTCTTCGTCTTCTTCTATCCCTTGCCGTTATTCTTTCACTGTTCGTGGCTTCAAGCCATGGAAACAAGCATGCAAAAGTTCATGGGAAGTTTCAGAGTTCAAAGTTCAAAGGGCAGAATCCAGAAATGGATAAGAGTCATTTCAAAGCAGAAGACATCAACATTGAAGCTAATCGTCTTGTTCATGATCATCAAGAAAATTTGAAGGAGAAAGATAGGATTGTGAGGCTTCCAGGGCAGCCTCAGGTTAGGTTCTCTCAGTATGGAGGGTATGTGACGGTGGATAAAAAAGCAGGACGTGCGTTTTATTATTATTTCACTGAAGCTCAACGTAATAAGGGGTCTTTGCCTCTTCTTCTGTGGCTCAATGGAGGCCCTGGATGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGACCTTTCAGAGTACAAAGTGATGGCAAAACGCTTTACAAGACCAGATATTCATGGAACTATGCTGCAAATGTATTGTTCCTTGAGTCACCTGCTGGGGTGGGATTTTCATACTCAAACACTTCATCAGACTATGGACTCAATGGAGATAAAAGAACAGCTGCAGATAACTATGTGTTCTTGGTGAATTGGTTGGAGAGGTTTCCAGAATATAAGAACAGAGATTTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTGCCTCAACTTGCTCACACTATTCTCCACCATAACATAAAGGCCAACAAGACAATCATCAACCTCAAAGGAATCATGATAGGGAATGCAGTGATAAACGACGAGACAGACTCGCGAGGAGTGTATGATTTTCTGGGCAGCCATGCAATAATCTCAGATTCAACAACTTCTACGATCAGCAAGCACTGTGATTTCTCGCGAAATGTTAATCAATCTCAAGAGTGCAAAGCGGCAGCTGATGAAGTTGAGATTGATACCGAATTCATTGATATCTACAACATCTATGCCTCTTTATGCAAGTATTCGAATCTCACTACCATCCCCAAGAAGAACTCTAATGTTATCGATCCATGTAGTGAATATTACCTGATAGCTTATATGAACCGACCTGATGTTCAAGAGGCTCTTCATGCCAATGTCACCAAACTCAAGTTCGAGTGGTCACCTTGCAGCGATGTCATTTCAGATTGGGTCGATAGCCCATCCACTATCATTCCCCTCTTACAAGAATTCCTCCTTAATGGGATTAGGGTTTGGATTTTCAGTGGTGACACTGATGGAACAGTGCCCGTCACCTCAACTCAATACTCTATCAACAAGATGAACCTAACGGTGAAAACTTCATGGCATCCTTGGTTCTTTAATGGAGAGATTGGTGGTTATACACAAGTATACAATGGAGACTTAGTATTTGCTACAGTGAGAGGAGCAGGGCATCAAGTGCCAAGCTACCAGCCAGCAAGAGCGCTTTCTTTGATCAAACACTTCTTAGATGGCACCCCTCTTCCTGATACAAGCAGATACTAG 1509 0.4228 MSKESFSVLLRLLLSLAVILSLFVASSHGNKHAKVHGKFQSSKFKGQNPEMDKSHFKAEDINIEANRLVHDHQENLKEKDRIVRLPGQPQVRFSQYGGYVTVDKKAGRAFYYYFTEAQRNKGSLPLLLWLNGGPGCSSLAYGAMQELGPFRVQSDGKTLYKTRYSWNYAANVLFLESPAGVGFSYSNTSSDYGLNGDKRTAADNYVFLVNWLERFPEYKNRDFYITGESYAGHYVPQLAHTILHHNIKANKTIINLKGIMIGNAVINDETDSRGVYDFLGSHAIISDSTTSTISKHCDFSRNVNQSQECKAAADEVEIDTEFIDIYNIYASLCKYSNLTTIPKKNSNVIDPCSEYYLIAYMNRPDVQEALHANVTKLKFEWSPCSDVISDWVDSPSTIIPLLQEFLLNGIRVWIFSGDTDGTVPVTSTQYSINKMNLTVKTSWHPWFFNGEIGGYTQVYNGDLVFATVRGAGHQVPSYQPARALSLIKHFLDGTPLPDTSRY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1908 502 Gene3D alpha/beta hydrolase 76 335 IPR029058 -
Dere07g1908 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 83 480 IPR001563 GO:0004185|GO:0006508
Dere07g1908 502 Gene3D - 352 390 - -
Dere07g1908 502 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Dere07g1908 502 Pfam Serine carboxypeptidase 86 493 IPR001563 GO:0004185|GO:0006508
Dere07g1908 502 FunFam Carboxypeptidase 76 335 - -
Dere07g1908 502 SUPERFAMILY alpha/beta-Hydrolases 78 497 IPR029058 -
Dere07g1908 502 ProSitePatterns Serine carboxypeptidases, serine active site. 225 232 IPR018202 GO:0004185
Dere07g1908 502 Gene3D - 398 493 - -
Dere07g1908 502 FunFam Carboxypeptidase 398 493 - -
Dere07g1908 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Dere07g1908 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Dere07g1908 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Dere07g1908 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 236 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1908 Dere-ChrDere07 31852690 31859183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1908 360 496 Calmodulin-binding Proteins AT2G22960 32.117 1.21e-17 79.3