LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g1906	ATGGACAAAGAAAGTTCCAGTGTAGTTCTTCTTCATCTTATTCTAACCCTTCTCAATATTTTTTCACTGTTCATGGCTTCAAGCCATGGAAACAAGCAAGCACAAGTTCATGGGAAGTTTCAGAGTTCGAAGTTCAAAGGGCAGAATCCAGAAATGGATAAGGGGCCTGGATGTTCATCTCTTGGCTATGGAGCTATGCAAGAACTTGGACCTTTTAGAGCACACAGTGATGGCAAAACGCTTTACAAAACCAGATACCCATGGAACTATGCTGCAAATGTGTTGTTCCTTGAGTCACCTGCTGGGGTAGGATTTTCCTACTCAAACACCTCGTCAGATTATGTACACACTGGGGATAAAAGAACAGCTGCAGATAACTATGTGTTCTCGGTGAATTGGTTAAAGAGATTTCCAGAATATAAGAACAGAGATTTCTACATTTCTGGAGAAAGCTATGGTGGTCACTATGTCTCTCAACTTGTTCACACTACTCTTCACCATAACAAAAAGGCCAACAAGACAATCATCAACCTCAAAGGAATCATGATAGGGAACCCAGTGATAAATGACGAGACAGACTCCAAAGGAATGTATGATTTTCTGGGTAGCCATGCGGTACTATCTGATTCAGCAGCTTCTACAATCAGCAAACACTATGATTTCTCACCAAATGCTAATATGTCTCGTGAGTGCAATGCAGCACTAGATAAAGTTCAGAATGATACCGAATTTATTGAAATCTACAACATTTATGCCCCTCTCTGCAAGAATCCCAATCTCACTACCATTCCGAAGAAGACCACTGTTGTGAATGATCCTTGTAGTGATAATTACGTAATAGCTTATATGAACCGACCTGATGTTCAAGAGGCTCTTCATGCCAATGTCACCAAACTCAAGTTTGACTGGCAACCTTGTAGCGAGGTCATTTCAAATTGGGTTGATAGCCCTTCCACTATCATTCCCCTTTTGCAAGAATTTCTCATTCATGGAATTAGGGTTTGGATTTTCAGTGGCGACACTGATGGAAGAGTGCCTGTCACCTCAACTCAATACCCTATCAACAAGATGAACCTAACGGTGAAAACTTCATGGCATCCTTGGTTCTTTAATGGAGAGATTGGTGGTTATACACAAGTATACAAAGGAGACTTAGTATTTGCTACAGTGAGAGGAGCAGGGCATCAAGTGCCAAGCTACCAGCCAGCGAGAGCCCTTTCTTTGATCAAACACTTCTTAGATGGCACCCCTCTTCCTGATACAAGCAGATATTAG	1275	0.4165	MDKESSSVVLLHLILTLLNIFSLFMASSHGNKQAQVHGKFQSSKFKGQNPEMDKGPGCSSLGYGAMQELGPFRAHSDGKTLYKTRYPWNYAANVLFLESPAGVGFSYSNTSSDYVHTGDKRTAADNYVFSVNWLKRFPEYKNRDFYISGESYGGHYVSQLVHTTLHHNKKANKTIINLKGIMIGNPVINDETDSKGMYDFLGSHAVLSDSAASTISKHYDFSPNANMSRECNAALDKVQNDTEFIEIYNIYAPLCKNPNLTTIPKKTTVVNDPCSDNYVIAYMNRPDVQEALHANVTKLKFDWQPCSEVISNWVDSPSTIIPLLQEFLIHGIRVWIFSGDTDGRVPVTSTQYPINKMNLTVKTSWHPWFFNGEIGGYTQVYKGDLVFATVRGAGHQVPSYQPARALSLIKHFLDGTPLPDTSRY	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g1906	424	Pfam	Serine carboxypeptidase	55	415	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	Gene3D	-	320	415	-	-
	Dere07g1906	424	ProSitePatterns	Serine carboxypeptidases, histidine active site.	385	402	IPR033124	GO:0004185
	Dere07g1906	424	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	54	402	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	SUPERFAMILY	alpha/beta-Hydrolases	55	419	IPR029058	-
	Dere07g1906	424	Gene3D	alpha/beta hydrolase	19	257	IPR029058	-
	Dere07g1906	424	Gene3D	-	274	310	-	-
	Dere07g1906	424	PRINTS	Carboxypeptidase C serine protease (S10) family signature	385	398	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	PRINTS	Carboxypeptidase C serine protease (S10) family signature	97	107	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	PRINTS	Carboxypeptidase C serine protease (S10) family signature	133	158	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	PRINTS	Carboxypeptidase C serine protease (S10) family signature	84	96	IPR001563	GO:0004185\|GO:0006508
	Dere07g1906	424	ProSitePatterns	Serine carboxypeptidases, serine active site.	147	154	IPR018202	GO:0004185
	Dere07g1906	424	FunFam	Carboxypeptidase	94	257	-	-
	Dere07g1906	424	FunFam	Carboxypeptidase	320	415	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g1906	Dere-ChrDere07	31826967	31833390	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g1906	282	418	Calmodulin-binding Proteins	AT2G22960	32.117	2.06e-17	78.2

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere07g1906	07	31826967	31833390	Dere07g1906	07	31826967	31833390	ECH