Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1905 ATGGCCAAAGAAAGCTTCAGTTTTCTTCTTCATCTTCTTCTATCCCTTCTCGTTATTCTTTCACTGTTCGTGGCTTCAACTTCAAGCCATGGAAACAAGCAAGCAAAAGTTCATGGGAAGTTTCAGAGTTCAAAGCTCAAAGGGCAGAATCCAGAAATGGATAACAGTCATTTCAAAGCACAAGAGATTGACATTGAAGCTCAACGTCTTTTTCATGATCTTCAAGAAAATTTGAAGGAGAAAGATAGGATTGTGAGGCTTCCAGGGCAGCCTCAGGTTAGGTTTTCTCAGTATGGAGGGTATGTGACTGTGGATAAAAAAACAGGACGTGCGTTTTATTATTATTTCACAGAAGCTCAACGTAATAAGGAGTCTTTGCCTCTTCTTCTGTGGCTCAATGGAGGGCCTGGATGTTCATCTCTTGCATATGGAGCAATGCAAGAACTTGGACCTTTTAGAGTACACAGTGATGGCAAAACGCTTTACAAAAATAGATACCCATGGAACTATGCTGCAAATGTATTGTTCCTTGAGTCACCTGCTGGGGTGGGATTTTCATACTCAAACACTTCATCAGACTATGGACTCAATGGAGATAAAAGAACAGCTGCAGATAACTATGTGTTCTTGGTGAATTGGTTGGAGAGGTTTCCAGAATATAAGAACAGAGACTTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTGCCTCAACTTGCTCACACTATTCTCTACCATAACATAAAGGCCAACAAGACAATCATCAACCTCAAAGGAATCATGATAGGAAACGCAGTGATAAATGACGAGACAGACACGAAAGGAATGTATGATTTTCTAGGAAGCCATGCGATAATCTCAGATTTCGCAGCTTCTACAATCAGCAAGCACTGTGATTTCTCGTCAACTTCAAATCTATCTCGTGAGTGCAATGCAGCAGCAGATGAAGTTGCGAAGGATATCGAGTTCATTGATATCTACAACATCTATGCCCCTCTCTGCAAGAATCCCAATCTCACTGTCATCCCCAGGAAGAACTCTATTGTTATTGATCCTTGCAGTGAAAATTACGTAACAGCTTATATGAACCGACCTGATGTTCAAGAGGCTCTTCATGCTAATGTCACCAAACTCAAGTTTGACTGGCAACCATGCAGCGATGTCATTACAAGATGGGTTGATAGCCCATCCACAGTCATTCCCCTTTTGCAAGAATTCCTCATTAATGGAATTAGGGTTTGGATTTTCAGTGGTGACGTAGATGGAAGAGTGCCTCATTCTTCAACTCAATACTCTATCAACAAGATGAACCTAGAGGTGAAAACCTCATGGCATCCTTGGTTCTTTGATGGAGAGGTTGCTGGTTACACACAAGTATACAAGGGAGACCTAGTGTTTGCTACAGTGAGAGGAGCAGGGCATCAAGTGCCAAGCTACCAGCCAGAAAGAGCCCTTTCAATGATCAAGCACTTCTTAGATGGCACCCCTCTTCCTGATACAAGCAGATATTAG 1515 0.4198 MAKESFSFLLHLLLSLLVILSLFVASTSSHGNKQAKVHGKFQSSKLKGQNPEMDNSHFKAQEIDIEAQRLFHDLQENLKEKDRIVRLPGQPQVRFSQYGGYVTVDKKTGRAFYYYFTEAQRNKESLPLLLWLNGGPGCSSLAYGAMQELGPFRVHSDGKTLYKNRYPWNYAANVLFLESPAGVGFSYSNTSSDYGLNGDKRTAADNYVFLVNWLERFPEYKNRDFYITGESYAGHYVPQLAHTILYHNIKANKTIINLKGIMIGNAVINDETDTKGMYDFLGSHAIISDFAASTISKHCDFSSTSNLSRECNAAADEVAKDIEFIDIYNIYAPLCKNPNLTVIPRKNSIVIDPCSENYVTAYMNRPDVQEALHANVTKLKFDWQPCSDVITRWVDSPSTVIPLLQEFLINGIRVWIFSGDVDGRVPHSSTQYSINKMNLEVKTSWHPWFFDGEVAGYTQVYKGDLVFATVRGAGHQVPSYQPERALSMIKHFLDGTPLPDTSRY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1905 504 SUPERFAMILY alpha/beta-Hydrolases 80 499 IPR029058 -
Dere07g1905 504 Gene3D - 354 391 - -
Dere07g1905 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 213 238 IPR001563 GO:0004185|GO:0006508
Dere07g1905 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 176 IPR001563 GO:0004185|GO:0006508
Dere07g1905 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 187 IPR001563 GO:0004185|GO:0006508
Dere07g1905 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Dere07g1905 504 ProSitePatterns Serine carboxypeptidases, serine active site. 227 234 IPR018202 GO:0004185
Dere07g1905 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
Dere07g1905 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 85 482 IPR001563 GO:0004185|GO:0006508
Dere07g1905 504 Gene3D - 400 495 - -
Dere07g1905 504 FunFam Carboxypeptidase 78 337 - -
Dere07g1905 504 FunFam Carboxypeptidase 400 495 - -
Dere07g1905 504 Gene3D alpha/beta hydrolase 78 337 IPR029058 -
Dere07g1905 504 Pfam Serine carboxypeptidase 88 495 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1905 Dere-ChrDere07 31807123 31814351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1905 362 498 Calmodulin-binding Proteins AT2G22960 32.117 2.63e-17 78.2