LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g1902	ATGGGGTACCTCTCTTGCAGAGCTGAATCCGCTGTCTCAACCTCCAATTTTCTTTCCCCTCTTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCCACTGACAAACCAGAGAAACCCATAAAGATTCAACACTTCCATTACAGTGACCTCGAAGCAGCCACCAATGGCTTCTCCGACCAAAAACTCTTAGGCAAAGGAAGCCATGGCCATGTCTACAAAGCCGTCCTTCGTGGCCGTCCCGTGGCCATTAAGAAAGGGAAGCTTCTTCCCCAACCCTCTTATTCTCCTTCTTCTACTTCTTCCTCTGCACCCGAAATCGCCAACGAGATTGACGTCTTGTCCAAAATCCAGAGCCCAAATTTGGTCAATTTGGTGGGTTTCGCGAACGGTTCAAACGACACGCTCTTGGTGATCGAGTTCATGAGCAATGGAACCCTCTACGATGTTCTTCATTCCTGTTCTTCGAAACCACCCAATTGGGGTCGAAGAATCCGACTGGCTTTACAAACTGCAAAAGCAATCGACACCCTTCATTCCTCAACCCCTCCTGTAATTCACCGAGACATCAAATCTGCAAATGTTCTGATAGACAGAAACTTCAATGCTCGATTGGGGGATTTTGGGTTAGCCTTAAGGGGTCACGTCGATGATTCTTCTCTCAAATTCAAATCCACCCCACCTGCAGGCACTATGGGTTATCTTGACCCTAATTATGTGACCCCAGATTGTCTAAGCACAAAAACTGATGTGTTTAGCTTTGGGATTTTGTTGTTAGAGATTATCAGTGGAAGAAAAGCAATTGATGTCACATACTCACCACCATCTATAGTGGATTGGGCTATTCCTCTCATAAAGAAAGGTAAGCTTCTAGCCGTTTATGATCCCAGAATACTACCTCCTAAGGATTTACTAGTAAGGAAGCAACTAGCAGTTATTGCAGCAAAATGTGTGAGGTCTTGCAGAGAAAGAAGGCCTTCAATGAAGGAGATAGTTCATTGGCTTAGTGGGTTGTGTAAATTGGTGCCTCTTCATTCATGGATCAATGGTCTTAACCTCCAAAATCCTTGCATGATGGTTGAGACAGTGGGAATACCAGTTGAAGCAAGAAATCCCCATATGAGTTCAAGAACAGAACTTGATGAGTTTGATGGTAAAGTGTGTAAATCTGCAATGAGAAATTCAAGGAGAGTGTTTTCTGATTTGGGGTTTGGCAGTAATCTGATGGACCTCATGGCCACAACCAACACACAGGAGGAGGATACAGAATTTGTGAAAGTTTGTAGCTCAAGGTTTGGCAGTGGAAGATATTTTCTGAGAGGAAGGAATAATCTGTACAGGGCTTGTGGTACTGAGAAAGATGCATTTGGTTTGAGTATGAGCCCAATTGTTGGAAGGAGCTCTAATGGATCTTGA	1410	0.444	MGYLSCRAESAVSTSNFLSPLPPPPPPPSSSTDKPEKPIKIQHFHYSDLEAATNGFSDQKLLGKGSHGHVYKAVLRGRPVAIKKGKLLPQPSYSPSSTSSSAPEIANEIDVLSKIQSPNLVNLVGFANGSNDTLLVIEFMSNGTLYDVLHSCSSKPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHVDDSSLKFKSTPPAGTMGYLDPNYVTPDCLSTKTDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKKGKLLAVYDPRILPPKDLLVRKQLAVIAAKCVRSCRERRPSMKEIVHWLSGLCKLVPLHSWINGLNLQNPCMMVETVGIPVEARNPHMSSRTELDEFDGKVCKSAMRNSRRVFSDLGFGSNLMDLMATTNTQEEDTEFVKVCSSRFGSGRYFLRGRNNLYRACGTEKDAFGLSMSPIVGRSSNGS	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g1902	469	ProSiteProfiles	Protein kinase domain profile.	56	346	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere07g1902	469	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	183	195	IPR008271	GO:0004672\|GO:0006468
	Dere07g1902	469	FunFam	Serine/threonine-protein kinase-like protein	140	347	-	-
	Dere07g1902	469	MobiDBLite	consensus disorder prediction	1	36	-	-
	Dere07g1902	469	Pfam	Protein kinase domain	57	331	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere07g1902	469	PANTHER	OS01G0253100 PROTEIN	34	336	-	-
	Dere07g1902	469	Gene3D	Phosphorylase Kinase; domain 1	29	139	-	-
	Dere07g1902	469	SUPERFAMILY	Protein kinase-like (PK-like)	30	333	IPR011009	-
	Dere07g1902	469	MobiDBLite	consensus disorder prediction	18	33	-	-
	Dere07g1902	469	Gene3D	Transferase(Phosphotransferase) domain 1	140	340	-	-
	Dere07g1902	469	SMART	serkin_6	56	333	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere07g1902	469	ProSitePatterns	Protein kinases ATP-binding region signature.	62	84	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g1902	Dere-ChrDere07	31060716	31062125	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g1902	33	330	Receptor kinase-like Gene Family	AT3G59420	42.904	6.84e-73	245

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Dere07g1902		Pkinase	8.9e-38	CL0016