Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1898 ATGGATGATGGAGATATCGAGCATTCAGATAAGCTTTCAGATAATGCTCAGTCGTCGAATCCAGAATCTTCTTGCAATGTTCAGGCTTCAACATCCATGGACACTACTAATGAATCGTTGAGGAAAACCAGAACTTGCACACATACTCATACTTGCGACTCTGGCCCAGATGCAGTGCATACACATACATGCTATCACACCCACACCCAAGTTTTTGCATCAGAAAAAGATGATAAGGTGCATACCAAACCCAAACCAAAAAGGCCTTTAGGCAACAGAGAAGCAGTTAGAAAGTATAGGGAGAAGAAGGCGCAGACGGCTTATTTAGAGGAGGAGGTTAAAAAATTGCATCTGCTGAATCAGCAACTACTAAGGAGATTGCAGAAGCAGGCAATTCTTGAAGCGGAGCTTTTGAGGTTGAGAAGTATTTTGGTAGATTGTAAGAGGAAAATTGACAATGAGTTTGGTGTTTTCCCTTATAAAAAGCAGTGTAATTCTTCTGCTACTTTTGATAAAGGGAATGCTGGTAGGGTCACCGGCCTCCAGTGTATGACCAATTTGTCATGCTTCAGTCCACATGCAGGATCTTCATCTCAGGAATTGGTTGGTCGAGGGGAAAGACACTGTCGACCTGCCATTGTTGATTGTCAAGTAAACGCAGATATGAAGGCAAGTACTGGAGAAGAAACTGCTGAACCAGTGGATAACTTGATCTCATCAGCATCTCAAGCTGGGAAATCTTCACAGCTACCATGTTGTTTCCAAGAGTTGCATTTGCCTTTTCCTCTTCCTCCTGATTGCAATATATTTTTATCTCCTGGATCGAAACAATGGAATCAGACAGGAAGAAAGCCCTTAAACAGCAAGCAGGTTATAACATACCGCATAGCTGTTTCTGCACATACTGATGAAAACATTGACAAGGACATGAGTTTAAGTGACACTGATTTCGATAGGTAG 960 0.4208 MDDGDIEHSDKLSDNAQSSNPESSCNVQASTSMDTTNESLRKTRTCTHTHTCDSGPDAVHTHTCYHTHTQVFASEKDDKVHTKPKPKRPLGNREAVRKYREKKAQTAYLEEEVKKLHLLNQQLLRRLQKQAILEAELLRLRSILVDCKRKIDNEFGVFPYKKQCNSSATFDKGNAGRVTGLQCMTNLSCFSPHAGSSSQELVGRGERHCRPAIVDCQVNADMKASTGEETAEPVDNLISSASQAGKSSQLPCCFQELHLPFPLPPDCNIFLSPGSKQWNQTGRKPLNSKQVITYRIAVSAHTDENIDKDMSLSDTDFDR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1898 319 SMART brlzneu 75 146 IPR004827 GO:0003700|GO:0006355
Dere07g1898 319 CDD bZIP 87 144 - -
Dere07g1898 319 MobiDBLite consensus disorder prediction 13 40 - -
Dere07g1898 319 Pfam Basic region leucine zipper 86 131 IPR004827 GO:0003700|GO:0006355
Dere07g1898 319 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 159 IPR031106 GO:0003700|GO:0006351
Dere07g1898 319 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1898 Dere-ChrDere07 31031371 31033166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1898 1 162 bZIP Transcription Factor Family AT4G35040 48.295 3.03e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere07g1898 bZIP_2 1.8e-09 CL0018