Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1888 ATGGCAAAGAAGAAGAGCTGGTTTAGTCTTGTGAAGAGGCTCTTTATATGGGACACACAGTCCAAACAAGAGAAGAAGGAAAAGAGAAGGAAATGGGTGTTCGGAATTGGAAGGCTAAAGATTAAGAGACTGCCTTCTATTACAGCTCCACCAGCACCATTAAAAGAAACAAAGCAAGAGGTAAAAAATCGCAATGTCCATCAATCTAGTGAAGAAACTGAAGAATCACAACTTGTTAAGTCTAGAAATGAGACTCCTCAACCCACGTACCAATGCCAGAGGGAGATTGAAGAATCTGCAGCTATCAAAATTCAAACTGCATTTCGGGGTTACCTTGCAAAGAAGGCTCTAAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATCAGAGGCAGAGCAGTAAGAAGGCAAGCTATTAGCATTCTGAAGGGCTTACAGTCCATGGTTGATATCCAATCACAGGTCTGTGCCAGGAGACTCCTGATGGTTAAAGGAAGATGGGATTTTGATGAGAACCAAGAGACTCCAAGTTCAAGAGACAAGATAATAAGGATGGATTCAAACAGTGAAAGGAGGTGGGATGACAGCATTTTGTTGAAGGAAGAGACAGATGCTTCTTACATAAGCACGAAAGAAGCAGTAGTTAGGAGAGACAGAATAAAAGAATACGCATTTAACCATAGAAGATCAGCAGAATCAGAAAGAAAAAAGGTAAATGGAAGATGGAGGTATTGGATGGAGCAGTGGGTAGACACCCAACTTTCCAAAAGTAAAGAACTTGAAGATTTAGACTCAGTATTCAGCTCACATTACAGAGCTGGGGAGGAAGATGGAGGAAGAAGACAGCTTAATCTGAGAAACGTTCAGATTCAGAGACAAAATCAAATTGAAGGCCTGTATTCTCCAAAACTTGCTCCAATAAGAAAGCCCTCTCCTCACAGGAGGCAATTCTCACTGGGAAATGATGACCATTCACTTCCAAACCCTCCTGTGCTTCCAACTTACATGGCAGCAACAGAATCAGCAAGAGCAAAAGCAAGATCCTCAAGCTCCCCAAAACTGAGATCTGTGAATTTGGATACAAACTTTGATGGGAACTCCCCATGCAAGAAGAATATAAACTTTGATGGGAACTCACCATGCAAGAAGAAGTTGTCTCTTGTATCATCTTCCATTAACCAGCAGAGATCTCCAGGCTTAAAGGGGCTTTCTGGGCCTATAAAATCAAGCAGGACAATGAAGGATCTCAGTATTAATTCAGATAGTTCATTTCTGTATGGACACGGTATTGGTAAAATATTTTAG 1308 0.4128 MAKKKSWFSLVKRLFIWDTQSKQEKKEKRRKWVFGIGRLKIKRLPSITAPPAPLKETKQEVKNRNVHQSSEETEESQLVKSRNETPQPTYQCQREIEESAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAISILKGLQSMVDIQSQVCARRLLMVKGRWDFDENQETPSSRDKIIRMDSNSERRWDDSILLKEETDASYISTKEAVVRRDRIKEYAFNHRRSAESERKKVNGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYRAGEEDGGRRQLNLRNVQIQRQNQIEGLYSPKLAPIRKPSPHRRQFSLGNDDHSLPNPPVLPTYMAATESARAKARSSSSPKLRSVNLDTNFDGNSPCKKNINFDGNSPCKKKLSLVSSSINQQRSPGLKGLSGPIKSSRTMKDLSINSDSSFLYGHGIGKIF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1888 435 MobiDBLite consensus disorder prediction 304 331 - -
Dere07g1888 435 Gene3D - 95 148 - -
Dere07g1888 435 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Dere07g1888 435 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Dere07g1888 435 Pfam Protein of unknown function (DUF4005) 313 388 IPR025064 -
Dere07g1888 435 SMART iq_5 96 118 IPR000048 GO:0005515
Dere07g1888 435 MobiDBLite consensus disorder prediction 57 79 - -
Dere07g1888 435 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Dere07g1888 435 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Dere07g1888 435 MobiDBLite consensus disorder prediction 48 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1888 Dere-ChrDere07 30879151 30881620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1888 1 425 IQD Protein Family AT5G13460 46.039 9.33e-106 318