Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1884 ATGAATTCTCATGTTTCAAAATCCAAATTTTCTCCTCCATTACTGTTTGAAGCATCAAGTTCTACCAGCAGTCGCAGTACCAGCAGCGAAACCGAAGATAGTCCCTTTTCCTCTAAGCGATTTTCTCTCCATGACAACAAATTTCAATTCCCCTGCATACCCATTTCTAAATCGTCCTCACATCGCGCATTGGCTATTCTCTCTGGCCACATCGGCTCTGTTTCATGCATAGCCCTGTGTGGCGAGTTCATACTCAGTGCCTCTCAGGGCAAGGACATCATCGTATGGCAACACCCAGATTTCAGGCTTTTCACGAAGTTCGGACAAGGAGATGGGTCGGTGAAATCTCTTGTAACGGTCGGAAACAAGGTCTTCACAGCCCATCAAGACAGCAAAATCAGAGTCTGGAAGCTTTCTAGAAGTTCAGAGAATGTGTTCAAGCTTGTGGAAATTCTTCCGACAACTATGGATTATTTGGGGAGATTCATGAAACAGAGCAACTACGTCCAAACAAGAAGGCACCACAAGCGTTTGTGGATTGAGCATTCAGATAGCATCTCCTGCTTGGCAGTTTTTAATGGGTTGATCTATTCTGGTTCATGGGACAAGACCCTTAAGGTGTGGAAGCTATCAAACTTGAAGTGTTTGGAATCCATTAAAGCTCATGAGGATGCCATTAATGGGTTAGCAGCTTGTAAAGGGGTTGTGTATTCTGCTTCTGCAGATGGAAAAATCAAAGCTTGGGGAAGAAAAGAGGGCAAAATGAAAAAAATCTCACATTCTTTAAAAGGGGTTCTAGAAGGTAATAAAGATCAGTCCTTTAATTCTGTGGTTGTTTCTGAAGATGGGAAATGGGTATATGGAGGGGGTTCTGATGGGTTTGTGATGGGGTGGGAAAAAATTGAAACTTCAGAACATAATCATATGACCCGGTCCAACCCAGATGGTTCAACCCGTGACCCAGAGACCCAGTCACCGAACCGGTCTATTCACCGGTTCAATTATCAAACCGGGTGCAAAAATTGGAAGCTTGTTTGTGCAACAAAGGCACATAAAATGGCTGTTTTGTGTATGTGTTTAATGGGGGAGGTTTTGTTCAGTGGATCATCAGATAAGAGTATTGGGATATGGAGGAGAGAGGGTTGTGGGGAAAAGCTTTGCAAAGTTGGGGTGATATGTGGGCATGAAGGGCCTGTGAGGTGTTTGGTGGCATCATATAGTAGTAGAAGTGGTGGGGGGATTTTGCTTTATAGCGGAAGCCTTGACAAGAGCTTGAGAGTTTGGTGGGTTCCTAGGTACAAGGAGGAGGAAATTGAGGAAAATTCATGTACTGTACCACCAGGAACATTGAATGAGACATAA 1362 0.4391 MNSHVSKSKFSPPLLFEASSSTSSRSTSSETEDSPFSSKRFSLHDNKFQFPCIPISKSSSHRALAILSGHIGSVSCIALCGEFILSASQGKDIIVWQHPDFRLFTKFGQGDGSVKSLVTVGNKVFTAHQDSKIRVWKLSRSSENVFKLVEILPTTMDYLGRFMKQSNYVQTRRHHKRLWIEHSDSISCLAVFNGLIYSGSWDKTLKVWKLSNLKCLESIKAHEDAINGLAACKGVVYSASADGKIKAWGRKEGKMKKISHSLKGVLEGNKDQSFNSVVVSEDGKWVYGGGSDGFVMGWEKIETSEHNHMTRSNPDGSTRDPETQSPNRSIHRFNYQTGCKNWKLVCATKAHKMAVLCMCLMGEVLFSGSSDKSIGIWRREGCGEKLCKVGVICGHEGPVRCLVASYSSRSGGGILLYSGSLDKSLRVWWVPRYKEEEIEENSCTVPPGTLNET 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1884 453 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 218 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 100 137 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 212 249 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 385 429 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 60 97 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 341 378 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 172 209 IPR001680 GO:0005515
Dere07g1884 453 SMART WD40_4 259 299 IPR001680 GO:0005515
Dere07g1884 453 Gene3D - 158 317 IPR015943 GO:0005515
Dere07g1884 453 Gene3D - 322 445 IPR015943 GO:0005515
Dere07g1884 453 Gene3D - 5 154 IPR015943 GO:0005515
Dere07g1884 453 PRINTS G protein beta WD-40 repeat signature 416 430 IPR020472 -
Dere07g1884 453 PRINTS G protein beta WD-40 repeat signature 124 138 IPR020472 -
Dere07g1884 453 PRINTS G protein beta WD-40 repeat signature 196 210 IPR020472 -
Dere07g1884 453 MobiDBLite consensus disorder prediction 1 38 - -
Dere07g1884 453 FunFam BnaA09g28200D protein 169 253 - -
Dere07g1884 453 SUPERFAMILY WD40 repeat-like 63 434 IPR036322 GO:0005515
Dere07g1884 453 MobiDBLite consensus disorder prediction 305 328 - -
Dere07g1884 453 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 19 433 IPR045182 -
Dere07g1884 453 Pfam WD domain, G-beta repeat 181 209 IPR001680 GO:0005515
Dere07g1884 453 Pfam WD domain, G-beta repeat 389 428 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1884 Dere-ChrDere07 30844456 30845817 Dispersed/Wgd