Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1881 ATGACAAGAGCTTCTTCAACTTCCAAGTTCTCAACCACCCCAGAAGTTTCCTATAAAACCAACATCACAAACACTATGCAGTTTTGCATTGTTCGCTTAGTTATCTCTCAGAAACACTCATCTGCGTTTTCGGTACAATTGAAAACGCGGTCAAAGGTTGTTCAATCAAAACATAACATGAGTTTGGATAGTACTGGTCTAACTCATGTATCTCCATGTTCAGGAAACATTGCAAATGCAGATATTGGCCTTGAGTACATCGCTCACCTTGCTTCCCCTGATGGCGATGCCATGCAGATAATAGCTTCTTATGTCACTTCAGAAGAGCTTCTCGTCAGAAAAGCATTCTTTGATTTGTGCCCATACTTGATGGTCTCCTTCGTTATCACTACTCTGGCCATTGTTGAAGCCACAGAAGGCATCCATGAGAAGAAAGAGATTTTGGACCAGATGGGGTATCAATTAACACAAGAAGCTGAGAAGTTGAAGCTTCGTTTCCAGTTCTATCCCATTCTTAGCAGACTAGAGAATCTGGATATCGAATGCTTGCCTGTAATTGCAGGAGAAGCTCTAGCAATCAGCTCTCTACTTCAGCTTCATTCTCTTCTCGCAACTTATGAAGACATAGTGACAAGCATGAACTCATCACCTGCAGCTGCATCAATGAATCTGCATAGAGCTCACCTGAAACAAAGACCTTTTGCAGATTCAGTAGAGAGGAAGAAGGTGGAGAAGATGCTTCTTGGGGAGCAAATAAACAATGTTATTGCATGTGAGGGAGTTGAGAGGAAGGAACGGCATGAGAAGCTTGAGAAAATGGCAATGACAAAAATTACACCATCAGGAGGCACTTACCAGTGGTCCAATGGTTCCGTTGCTTGCCGGAGTCGCTCCAGGCGGAGGTCCGTTCGTTCGCTGAGAGTGGCCGCCGCTGCTGCCGGTCACGATGGACCGGGAGGACTCAAATGA 969 0.4479 MTRASSTSKFSTTPEVSYKTNITNTMQFCIVRLVISQKHSSAFSVQLKTRSKVVQSKHNMSLDSTGLTHVSPCSGNIANADIGLEYIAHLASPDGDAMQIIASYVTSEELLVRKAFFDLCPYLMVSFVITTLAIVEATEGIHEKKEILDQMGYQLTQEAEKLKLRFQFYPILSRLENLDIECLPVIAGEALAISSLLQLHSLLATYEDIVTSMNSSPAAASMNLHRAHLKQRPFADSVERKKVEKMLLGEQINNVIACEGVERKERHEKLEKMAMTKITPSGGTYQWSNGSVACRSRSRRRSVRSLRVAAAAAGHDGPGGLK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1881 322 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 140 271 IPR005202 -
Dere07g1881 322 Pfam GRAS domain family 236 272 IPR005202 -
Dere07g1881 322 Pfam GRAS domain family 141 208 IPR005202 -
Dere07g1881 322 ProSiteProfiles GRAS family profile. 50 322 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1881 Dere-ChrDere07 30803063 30808320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1881 237 274 GRAS Transcription Factor Family AT1G50420 68.421 8.93e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere07g1881 GRAS 8.6e-11 CL0063