Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1879 ATGCAAACAAACAAACAAACACAGAAGGAGAAGCAATCAGCCATGGCTATGGATTCCAAAGAGAATCATCATATTCATCACGAGCCATCTCTCAAGGAAGACGTCCTCGACGATGACTCTGCGTGTCTTTCTGCCATGCTTGGGTGTTGCAGCCAGATCTACTCTGCAGCTCTGAACGCTGCTCTCGAGCTCAAGCTGTTTGAGATCATAGCTAGGGAAGACGGTAGACACGTGTCGGCCTCTGAGGTAGCCTCTCACCTTCCGACCTCGACCCATCACCCTCACTTGGCTTTCAGGATCGATCGCATCTTGAGGCTTCTGGCGAGTCACTCTCTTCTCACTTGTTCTTATCGTCACAACGAAGATGGTGGCACTGAGAGACTGTATGCGATTTCTCCCTCTGGAAAGTACTTCGTTGGAGGCGACGATAATGGTGGATTTTTGGCTCTATTCTCGTCGTTCATATGTCATCGAGCACTTGTGGATGCCTGGTAA 495 0.4949 MQTNKQTQKEKQSAMAMDSKENHHIHHEPSLKEDVLDDDSACLSAMLGCCSQIYSAALNAALELKLFEIIAREDGRHVSASEVASHLPTSTHHPHLAFRIDRILRLLASHSLLTCSYRHNEDGGTERLYAISPSGKYFVGGDDNGGFLALFSSFICHRALVDAW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1879 164 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 46 164 IPR016461 GO:0008168
Dere07g1879 164 MobiDBLite consensus disorder prediction 14 31 - -
Dere07g1879 164 MobiDBLite consensus disorder prediction 1 31 - -
Dere07g1879 164 FunFam Caffeic acid 3-O-methyltransferase 19 138 - -
Dere07g1879 164 Pfam Dimerisation domain 57 108 IPR012967 GO:0046983
Dere07g1879 164 Gene3D - 22 138 IPR036388 -
Dere07g1879 164 SUPERFAMILY "Winged helix" DNA-binding domain 38 143 IPR036390 -
Dere07g1879 164 PANTHER O-METHYLTRANSFERASE 36 161 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1879 Dere-ChrDere07 30786385 30786879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1879 36 164 Monolignol Biosynthesis Gene Families AT5G54160 39.535 2.35e-21 87.0