Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1857 ATGGCTACTCTGGTTGCTCCTAATCAAACCTCTCCTGTTGAAGATGCCGAGGCTCTCCACAAGGCCTTCAAAGGGTGGGGGACTGATGAGAAGGCAGTGATAGCAATATTGGGACGAAGAAATGCGAGTCAGAGGCAGCAAATAAGAGAAGCATACGAGCAACTTTTCAATGAGAATCTCATCAAACGCCTTGAGTCTGAGATCTCCGGTGACTTTGAGAGAGCTGTGTATAGGTGGATTCTGGAACCTGCTGATCGAGAGGCAGTGTTGGCCAATGTGGCCGTGAAGAATGGGAAGAACATTGACTACACTGTGATAGTGGAAGTTGCTTGTGTGCATTCCCATGAAGAGCTCTTGGCTGTGAGACGAGCCTACCACCATCGCTATAAGCATTCTCTCGAAGAAGATGTGGCTTCTCATACCTCTGCTCATCTCCGTCAGCTGCTAGTAGGGTTGGTGAGCTCATATAGGTATGGAGGAGATGAGATAAATGCGAGATTGGCACAAAGTGAAGCAGACATTCTTCATGGAGCTCTCAAAGACAAGAAAGGCAACTACGATGAAGTTATAAGGATTCTTACTACGAGAAGCAAGACTCAGCTTGTTGCTACTTTCAATCGCTACAGGGATGTTCATGGATCTTCCATCACTAGGAAATTGCTGGATGATGCATCAGATGATTTCCTCAAGGCATTGCACACTGCCATTCGTTGCATCAATGATCATAAGAAGTACTATGAAAAGGTTCTGCGCAATGCAATCAAGAGGGTTGGAACATGTGAGGATGCACTCACTCGTGTGATCGTGACAAGGGCAGAGAAGGACATGAAGGACATTAAAGATCTTTATTACAAGAGAAACAGTGTTCATCTGGAGCATGCAGTGGCCCAGGAAGTTTCTGGGGATTACAAGAAGTTCCTCCTCACTCTTCTGGGAAAACAAGATTAG 948 0.4589 MATLVAPNQTSPVEDAEALHKAFKGWGTDEKAVIAILGRRNASQRQQIREAYEQLFNENLIKRLESEISGDFERAVYRWILEPADREAVLANVAVKNGKNIDYTVIVEVACVHSHEELLAVRRAYHHRYKHSLEEDVASHTSAHLRQLLVGLVSSYRYGGDEINARLAQSEADILHGALKDKKGNYDEVIRILTTRSKTQLVATFNRYRDVHGSSITRKLLDDASDDFLKALHTAIRCINDHKKYYEKVLRNAIKRVGTCEDALTRVIVTRAEKDMKDIKDLYYKRNSVHLEHAVAQEVSGDYKKFLLTLLGKQD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1857 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Dere07g1857 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Dere07g1857 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Dere07g1857 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Dere07g1857 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Dere07g1857 315 ProSiteProfiles Annexin repeat profile. 82 154 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 PANTHER ANNEXIN 8 310 - -
Dere07g1857 315 Gene3D Annexin 242 315 IPR037104 GO:0005509|GO:0005544
Dere07g1857 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Dere07g1857 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 Pfam Annexin 171 233 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 Pfam Annexin 97 152 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 PRINTS Plant annexin signature 119 133 IPR009118 -
Dere07g1857 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Dere07g1857 315 PRINTS Plant annexin signature 161 181 IPR009118 -
Dere07g1857 315 ProSiteProfiles Annexin repeat profile. 166 237 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Dere07g1857 315 FunFam Annexin 1 81 - -
Dere07g1857 315 FunFam Annexin 82 153 - -
Dere07g1857 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 SMART annex3 183 235 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Dere07g1857 315 FunFam Annexin 166 240 - -
Dere07g1857 315 Gene3D Annexin 166 240 IPR037104 GO:0005509|GO:0005544
Dere07g1857 315 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Dere07g1857 315 FunFam Annexin 242 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1857 Dere-ChrDere07 30337034 30341071 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1525 08 20157933 20162475 Dere07g1857 07 30337034 30341071 CCT
Dere07g1857 07 30337034 30341071 Dere07g1857 07 30337034 30341071 ECH