Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1852 ATGTCAACACCAATGTTGATGGAGTCCCTAGTTCTTAATCTCCACGAGATCTCAGCTGTCAAATTTGGCAAATTCAGGCTCAAATCTGGCATTTCCTCACCAATCTACTTAGACCTCCGCCTCATAATATCCTACCCTTCCCTCCTCCGCCAAATCTCCCAAACAATGATTTCCTCTGTCTCTTCCTCTTCGTTTGACCTTGTATGTGGTGTCCCTTACACTGCTCTACCCATTGCCACTTGTGTCTCTGTCACTCATAACATTCCCATGGTCATGCGTCGCAAGGAAATTAAAGACTATGGCACTGCTAAAGCTATTGAAGGTGATTTCAAGGCTGGCCAAAGTTGCTTAATCGTTGAGGACCTACTTACCAGTGGCACTTCAATATTAGAGACCGCTGCGCCCCTGCGTGCTGCAGGTTTGAAGGTCAGTGAGGCCGTCGTTTTGATTGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGGAGAATGGGATCAGGCTGCATTCAATTGTTAAATTGACTGAGATGGTGAAAATTTTGACACAAAAAGGAAAGCTTGAGAAGGAGATGGTAGAGGTTGTTATGAAATTCTTAGAGGAGAATCAGAGGGTTGCTGCTTTGGCAAAAGTGGAGAAGCCTACGAAGGTCAAGGCTTTTTCATTTGGGGAGAGGGCAAAGTTGTCCAAAAATCCAACAGGAAAGAGGTTGTTTGAGATAATGGCTGAGAAGGAGAGTAATCTTTGTTTGGCTGCGGATGTTGGAACTGCAGCTGAATTGCTTGAGATTGCTGAGAAAGTTGGGCCTGAGATATGCTTGCTGAAAACTCATGTAGATATTTTGCCAGATTTTACTCCAGATTTTGCATCTAAGCTTCGCTTGATTGCAGAAAAGCATAACTTCTTAATCTTTGAGGACCGTAAATTTGCTGACATTGGTAACACAGTGACTATGCAGTATGAAGGAGGGATTTATCATATATTGGAATGGGCTGACATAGTAAATGCTCACATTATTTCCGGTCCTGGAATTGTAGATGGATTGAAATTAAAGGGTTTGCCTCGCGGTAGGGGTCTGTTGCTGCTTGCTGAAATGAGTTCAACCGGTAACCTTGCCAAAGGAGACTATACAGCTGCAGCAGTGAAAATTGCTGAGGATCATTCTGATTTTGTTATTGGCTTCATTTCGGTCAATCCAGCCTCATGGCCAGGGCCACCCATAAATCTATCTTTCATTCATGCAACTCCCGGTGTTCAAATGGTGACTGGTGGTGATGCTTTGGGGCAGCAATATAGTACTCCATATTCTGTTGTATATAATAGGGGTAGTGACATAATAATTGTGGGTCGTGGCATCATCAAGGCAGCAAATCCAGCTGAGGCAGCTCATGAATATCGACTCGAAGGATGGAAAGCTTATATGGCTAAGTGCTCGTGA 1434 0.4393 MSTPMLMESLVLNLHEISAVKFGKFRLKSGISSPIYLDLRLIISYPSLLRQISQTMISSVSSSSFDLVCGVPYTALPIATCVSVTHNIPMVMRRKEIKDYGTAKAIEGDFKAGQSCLIVEDLLTSGTSILETAAPLRAAGLKVSEAVVLIDREQGGRENLEENGIRLHSIVKLTEMVKILTQKGKLEKEMVEVVMKFLEENQRVAALAKVEKPTKVKAFSFGERAKLSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFASKLRLIAEKHNFLIFEDRKFADIGNTVTMQYEGGIYHILEWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSTGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGPPINLSFIHATPGVQMVTGGDALGQQYSTPYSVVYNRGSDIIIVGRGIIKAANPAEAAHEYRLEGWKAYMAKCS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1852 477 SMART OMPdecase_2 246 464 IPR001754 GO:0004590|GO:0006207
Dere07g1852 477 NCBIfam orotidine-5'-phosphate decarboxylase 247 465 IPR014732 GO:0004590|GO:0044205
Dere07g1852 477 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 302 315 IPR018089 GO:0004590|GO:0006207
Dere07g1852 477 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 233 IPR023031 GO:0004588|GO:0006221
Dere07g1852 477 Gene3D Aldolase class I 215 477 IPR013785 -
Dere07g1852 477 FunFam Uridine monophosphate synthetase 216 477 - -
Dere07g1852 477 FunFam Uridine monophosphate synthetase 3 207 - -
Dere07g1852 477 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 245 464 IPR001754 GO:0004590|GO:0006207
Dere07g1852 477 SUPERFAMILY Ribulose-phoshate binding barrel 219 473 IPR011060 -
Dere07g1852 477 Pfam Phosphoribosyl transferase domain 61 158 IPR000836 -
Dere07g1852 477 CDD PRTases_typeI 65 172 IPR000836 -
Dere07g1852 477 CDD OMP_decarboxylase_like 247 464 - -
Dere07g1852 477 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 4 476 - -
Dere07g1852 477 NCBIfam orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Dere07g1852 477 SUPERFAMILY PRTase-like 7 197 IPR029057 -
Dere07g1852 477 Gene3D - 3 212 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1852 Dere-ChrDere07 30079509 30083922 Dispersed/Wgd