Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1844 ATGCTCCCGAACGCCAGATACTTCACCATCAACAGCATCTCCTACTTTGATCGCAAGCTTTGGATCAACGACCCAGATAACTGCCTCCCAAAACGCTACCTTCAGCAACGAACCATAGACCTTGCAGGTTCTCCCTTTGAACTGAGCAACAATCAGAGGCTTGTGAACTTCACCTTTTTCAACTGCTCCAACAAGGATTTTCACGGCTACTACTACCCAATGGATCCCATAGAGTGCCTCAGCAACCACAATGGCGAAACGTCGGTGGTGGCTATGTCGGAGCTGGAGCCGTTTTATCCGGTGCTGGCAGGGTGTAAAGTGATTTCCTCAGCTCTGGTTCCATACGGCGGAGTGGGGTCTGAGTTATACTGGACAGGGGTGCTTTTCGGTGATATCGAGTTGCAATGGACAAACCCTACCTGTGGTTATCTACATTGTGAAGAAGGTTCAAAGAAAAGTAGATACACCCTAGGCTTAAGCTTGGGAATACCAGCTGGAGCCCTATGTTTCATCATGATTTCTTGTATAGTTTGCGCTGCTATGACGAGGGCGAACGCAGAAGGAGCTGAAAACACAGAATCAAATAATAGTAATCAGCAACAACCTTCAGTTGCAGCAGCAACAACAATAATGGTGGCAAATGAAGTGAACATAGAAAGATTCCCAAAAACACAGGTTGAAGATATTGGAGATTTGCCAAACCCTAATGACAATGTGTGCTCTCTATGTCTCTGTGAGTACCAACCAAAGGAGTTATTGAGGACCATACCAGATTGCAACCACTATTTCCATGCAAATTGCTTAGAAGAGTGGCTTAAGATTAATGCTTCATGCCCTTTGTGTCGAAATTTGCCATAG 858 0.4545 MLPNARYFTINSISYFDRKLWINDPDNCLPKRYLQQRTIDLAGSPFELSNNQRLVNFTFFNCSNKDFHGYYYPMDPIECLSNHNGETSVVAMSELEPFYPVLAGCKVISSALVPYGGVGSELYWTGVLFGDIELQWTNPTCGYLHCEEGSKKSRYTLGLSLGIPAGALCFIMISCIVCAAMTRANAEGAENTESNNSNQQQPSVAAATTIMVANEVNIERFPKTQVEDIGDLPNPNDNVCSLCLCEYQPKELLRTIPDCNHYFHANCLEEWLKINASCPLCRNLP 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1844 285 Pfam Ring finger domain 239 282 IPR001841 -
Dere07g1844 285 ProSiteProfiles Zinc finger RING-type profile. 240 282 IPR001841 -
Dere07g1844 285 SUPERFAMILY RING/U-box 231 283 - -
Dere07g1844 285 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 284 IPR046948 -
Dere07g1844 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 284 IPR013083 -
Dere07g1844 285 SMART ring_2 240 281 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere07g1844 Dere-ChrDere07 29924183 29928362 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1844 2 285 C3H Transcription Factor Family AT2G46495 32.313 1.36e-36 131