Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1840 ATGGGTATGGCTGCAGAGTCCCAGTTCCACGTTTTGGCTGTTGATGATAGTCTCATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCATCCTTTCAAGTTACTGCAGTGGATTCTGGAAGCAAGGCTTTGAAATTTCTTGGTTTGATTGAAGATGAGCAGAGAATTGCAGATACTATCTCTGTTGATTCAGATAACCATCAGGATGTAGAAGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGATCTCCTAAGAAAAATCAAGGAATCTAAATCTCTCAAAGACATACCGGTAGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAAGAATTTTTTCTGAAACCAGTTCAGCAATCAGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAGAGTTAAGGAAGAGGAAGACCAGTTCATCAATAACAAAAGAAAGGACATGGAAGAAACCTATTCACCAGATAAAACCAGAGCAAAAATATAG 537 0.3892 MGMAAESQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLIEDEQRIADTISVDSDNHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLMKSRVKEEEDQFINNKRKDMEETYSPDKTRAKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1840 178 SUPERFAMILY CheY-like 8 148 IPR011006 -
Dere07g1840 178 Gene3D - 10 174 - -
Dere07g1840 178 CDD REC_typeA_ARR 11 141 - -
Dere07g1840 178 MobiDBLite consensus disorder prediction 152 178 - -
Dere07g1840 178 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Dere07g1840 178 SMART REC_2 9 145 IPR001789 GO:0000160
Dere07g1840 178 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Dere07g1840 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 159 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1840 Dere-ChrDere07 29810781 29811999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1840 1 178 Response Regulator Gene Family AT3G57040 55.066 2.37e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere07g1840 Response_reg 1.4e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1840 07 29810781 29811999 Dere08g1405 08 18547874 18551573 CCT