Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1816 ATGAAAGTCCCCTGCTGTTCGGTTTGCCAAACGCGATACAACGAGGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGGCATGGATTTTGCAGAGAGTGTCTTTCGAGAATGTTCTCGGCGTCTCCAGATACGACGCTCGCGTGTCCAAGGTGTCGCCATGTGTCCACCGTCGGGAACTCTGTTCAAGCTCTGCGCAAGAACTACGCTGTGCTCGCTCTTATTCACTCGGCTTCGAACGCTTCGGGTTCAAATTTCGACTGTGACTTCACGGATGATGATGAAGAAGGGGGTGATGGTGGTGACGAAGATGGGGACAATGATGAGGACTCGGTCATACGCCGCCGGTGTAGCCGTGGGTCCCAAACATCTAGCTCCGGCGGCTGTGGACCAGTTATCGAGGTCGGAGTGCACCAAGACTTGAAATTGCTGCGACGGATAGGAGAGGGGAGGAGGGCTGGTATGGAAATGTGGACGGCGGTAATTGGTGGTGGTGGTGGTGGTGGTGGTGGAAATGGACGGTGCCGGCATCACGTGGCAGTGAAGAAGGTGACGATAGTGGAGGAGATGGATTTGGATTGGGTGCAGGGTCAACTTGAGAATCTGCGTCGTGCTTCGATGTGGTGTAGGAATGTGTGTACTTTTCATGGGGCAATGAGGTTGGAAGAGAGTTTGTGTCTTGTGATGGATCGGTGTAATGGATCAGTTCAGTCTGAGATGCAGCGCAATGAGGGAAGACTTACTCTGGAGCAAGTCTTAAGATATGGGGCAGACATTGCAAGAGGGGTGGCTGAGCTTCATGCTGCAGGCATTGTTTGCATGAATTTGAAACCATCCAATCTTCTTCTTGATGCAAATGGTCGTGCAGTGGTTTCGGATTATGGACTTGCTGCAATTTTGAAGAAGCCTTCCTGTCGGAAGGCCCGACCAGAGTGTGATTCCTCTAAGATCCATTCATGCATGGAGTGTATAATGCTCAGCCCACATTACACAGCTCCAGAGGCTTGGGAACCTGTGAAGAAGTCATTGAATTTATTCTGGGATGATGCTATAGGTATATCTGCAGAGTCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCTTGGACTGGTTTAAGTGCCGAGGAAATTTATCGAGCAGTTGTCAAGGGAAAGAAACTGCCACCACAGTATGCTAGTGTGGTTGGTGGTGGAATACCTAGGGAACTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCCAAAAGGCCTAGTTTTAACGCGATGCTAGCAATATTTCTTCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGACTTTGTTCAGCCCTCTGTGCCAAATGCGGTAGAGCCTTCCCCTCTACCTGAACCAGAAGTTCTACAAGGAAACCCAAACCATCTTCATCGACTTGTGTCTGAAGGGGATGTTGGAGGTGTTAGAGATCTTCTTGAAAAGGCTGCATCAGAAAATGGTAGCAACTATATTTCTTCTCTTTTGGAAGCTCAAAATGCTGATGGACAGACTGCACTTCATTTGGCTTGTAGACGTGGTAGTGCAGAACTTGTTGAAGCTATTTTGGAGTACAAAGAGGCAAATGTTGATGTCCTGGACAAAGATGGAGATCCTCCTCTTGTATTTGCATTAGCAGCTGGATCGCCAGAATGTGTCCATAGTCTTATAAGAAGAAATGCTAATGTGAGATCTCGGTTGAGAGATGGCCTTGGCCCATCTGTTGCTCATGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTACTATTGGCTGGGGCCGATCCTAATGCAGTGGATGATGAAGGTGAAACTGTACTGCATAGAGCAGTTGCTAAGAAGTACACAGACTGTGCTCTTGTGATACTGGAGAATGGGGGCAGCAGATCAATGGGCATCTTAAATTCAAAGAATCTGACACCACTTCACTTGTCTGTGGCAACTTGGAACGTGGCTGTTGTGAAAAGATGGGTAGAAGTTGCAACTTCTGATGAGATTGCAGAAGCAATTGACATACCAAACCCTATTGGCACTGCACTGTGCATGGCAGCTGCTTCTAAGAAGGACCACGAAATTGAGGGCAGAGAATTGGTGCGGATATTGCTTGCTGCAGGAGCAGATCCATCTGCTCAAGATGCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACTAATGACGTTGAGTTGGTCAAGGTCATTCTTGCTGCTGGTGTTGATGTGAATATTCGGAATGTGCACAATAGTATACCTCTTCACTTAGCTCTAGCTAGGGGAGCAAAGTCATGTGTTGGATTGCTTCTATCTGCTGGGGCTGATTATAATTTGCAGGACGATGATGGTGACAATGCTTTCCATATAGCAGCAGAGACAGCAAAAATGATTCGTGAAAATCTTGATTGGCTCATTGTTATGCTAAGAAATCCTGATGCTGATGTTGAAGTGAGAAACCACAGTGGCAAGACACTACGGGACATCTTAGAGGCCCTTCCACGAGAATGGATATCTGAAGATCTGATGGAGGCGTTAATCAGTAGAGGAGTTCATCTATCTTCTACAATATTTGAAGTGGGAGATTGGGTGAAGTTTAAAAGAACTGTCACAACTCCAACATATGGCTGGCAAGGTGCGAGACAAAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGAGAGAATCTCATTGTTTCATTTTGTTCTGGAGAGGCCCGTGTTTTGGGAAATGAAGTTGTAAAAGTCATTCCATTAGACAGGGGACAACACGTACAGCTTAAAGCAGATGTAAAAGAGCCCAGGTTTGGTTGGCGTGGACAGTCACGTGACAGCATTGGGACAGTTTTATGTGTTGATGATGATGGAATTCTTCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCGTCTGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGTATTCGCCCCACTCTTACATCTGCAAAGCATGGATTAGGATCTGTGACACCAGGAAGCATTGGTATAGTATATTGTATAAGACCAGACAGTAGTCTCTTAATTGAGCTGAGCTATCTGCCAAATCCATGGCATTGTGAACCAGAAGAGGTTGAGCACGTTGCTCCTTTTAGGATTGGTGATCGGGTATGTGTGAAGCGATCAGTTGCAGAACCTAGATATGCTTGGGGCGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTATTAATAATTGATATACCAAATCGACCCATACCATGGCAGGCTGATCCATCGGACATGGAGAAGGTGGAAGATTTTAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGATAATCCATAGCTTGGAGGAGGATGGCGATATGGGCATTGCCTTTTGCTTCAGGAGTAAGCCTTTTTGTTGCTCTGTCACTGATGTGGAGAAGGTTCCCCCTTTTGAGGTGGGACAAGAGATTCATGTGATGCCATCTGTTACTCAGCCTTGGCTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTAAATGTGAGAGTCACTGGAAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGTCTTCCAGGATTTGAAGTTGGTGATTGGGTACGCTCAAAACCAAGCCTGGGAACCAGACCAAGCTATGACTGGAATAGTGTTGGCAAAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGTAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTACGTCCGGTTTCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGGGGAGCTCAGCCTGATTCTCGAGGTGTTATAACCAGTATTCATGCTGATGGAGAAGTGAGGGTGGCATTCTTTGGTTTGCCAGGTTTATGGAGAGGAGATCCTGTTGACCTTGAGATCGAGCAGATATTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATAATGCGGATAACTGGAAATCTGTTGGGCCAGGTAGTGTTGGTGTTGTACAAGGATTAGGGTATGAAGGTGATGTATGGGACAGAAACACTCATGTTGGCTTTTGCGGGGAGCAAGAAAGGTGGGTAGGACCAACTTCCCATCTTGAAAGAGTTGAGAAACTCCTCATTGGACAAAAGGTTAGAGTTAAACCAACTGTAAAGCAGCCAAGATTTGGGTGGTCAGGACACAGCCACACTAGTATCGGAACCATATCAACAATTGATGCTGATGGAAAACTTAGAATATACACTCCGGCAGGTTCGAAAGCATGGATGCTGGACCCATCAGAAGTGGATTTGGTAGAAGAGGAGGAGCTTCATATTGGAGACTGGATCAAGGTTAGAGCCTCAGTTTCAACCCCAACACACCAGTGGGGGGAAGTGAACCATTCAAGCATAGGGGTGGTGCATCGGATGGAGGATGATGATCTGTGGGTGGCATTCTGTTTTACGGAGAGGCTATGGCTTTGTAAGGCCTGGGAAATGGAACGGGTTAGACCATTTAAAGTTGGGGACAAAGTTAGGATCCGGGATGGACTGGTCTCCCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCATAGGACATGTGACTGGAGTAGATGCAAACGGCAAGCTAAGAATTAAGTTCCGATGGCGGGAAGGGAGGCCCTGGATAGGAGACCCTGCCGATATAGTTCTTGATGAGAATTAA 4896 0.4688 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDTTLACPRCRHVSTVGNSVQALRKNYAVLALIHSASNASGSNFDCDFTDDDEEGGDGGDEDGDNDEDSVIRRRCSRGSQTSSSGGCGPVIEVGVHQDLKLLRRIGEGRRAGMEMWTAVIGGGGGGGGGNGRCRHHVAVKKVTIVEEMDLDWVQGQLENLRRASMWCRNVCTFHGAMRLEESLCLVMDRCNGSVQSEMQRNEGRLTLEQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVVSDYGLAAILKKPSCRKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWTGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFVQPSVPNAVEPSPLPEPEVLQGNPNHLHRLVSEGDVGGVRDLLEKAASENGSNYISSLLEAQNADGQTALHLACRRGSAELVEAILEYKEANVDVLDKDGDPPLVFALAAGSPECVHSLIRRNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVAKKYTDCALVILENGGSRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHEIEGRELVRILLAAGADPSAQDAQNGRTALHTAAMTNDVELVKVILAAGVDVNIRNVHNSIPLHLALARGAKSCVGLLLSAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLRNPDADVEVRNHSGKTLRDILEALPREWISEDLMEALISRGVHLSSTIFEVGDWVKFKRTVTTPTYGWQGARQKSVGFVQSVPDRENLIVSFCSGEARVLGNEVVKVIPLDRGQHVQLKADVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPSEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDMGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPWLGWSNESPATVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGKESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPCFKVGQYVRFRTGLVEPRWGWRGAQPDSRGVITSIHADGEVRVAFFGLPGLWRGDPVDLEIEQIFEVGEWVRLKDNADNWKSVGPGSVGVVQGLGYEGDVWDRNTHVGFCGEQERWVGPTSHLERVEKLLIGQKVRVKPTVKQPRFGWSGHSHTSIGTISTIDADGKLRIYTPAGSKAWMLDPSEVDLVEEEELHIGDWIKVRASVSTPTHQWGEVNHSSIGVVHRMEDDDLWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIRDGLVSPRWGWGMETHASIGHVTGVDANGKLRIKFRWREGRPWIGDPADIVLDEN 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat region circular profile. 766 798 - -
Dere07g1816 1631 Pfam Ankyrin repeats (many copies) 590 637 IPR002110 GO:0005515
Dere07g1816 1631 Pfam Protein kinase domain 175 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1816 1631 FunFam E3 ubiquitin-protein ligase KEG 458 688 - -
Dere07g1816 1631 Gene3D Transferase(Phosphotransferase) domain 1 231 449 - -
Dere07g1816 1631 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Dere07g1816 1631 Gene3D - 687 773 IPR036770 -
Dere07g1816 1631 SUPERFAMILY Ankyrin repeat 504 841 IPR036770 -
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat profile. 733 765 IPR002110 GO:0005515
Dere07g1816 1631 MobiDBLite consensus disorder prediction 85 110 - -
Dere07g1816 1631 SMART ring_2 6 51 IPR001841 -
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat region circular profile. 518 540 - -
Dere07g1816 1631 SUPERFAMILY Protein kinase-like (PK-like) 173 465 IPR011009 -
Dere07g1816 1631 SMART ANK_2a 518 548 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 799 834 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 693 728 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 587 616 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 552 581 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 655 686 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 766 795 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 733 762 IPR002110 GO:0005515
Dere07g1816 1631 SMART ANK_2a 620 649 IPR002110 GO:0005515
Dere07g1816 1631 Gene3D - 587 686 IPR036770 -
Dere07g1816 1631 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1630 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Dere07g1816 1631 CDD RING-HC_KEG-like 3 59 - -
Dere07g1816 1631 Pfam Ankyrin repeats (3 copies) 712 797 IPR002110 GO:0005515
Dere07g1816 1631 Pfam Ankyrin repeats (3 copies) 498 580 IPR002110 GO:0005515
Dere07g1816 1631 Pfam RING-type zinc-finger 6 49 IPR027370 -
Dere07g1816 1631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Dere07g1816 1631 PRINTS Ankyrin repeat signature 519 534 IPR002110 GO:0005515
Dere07g1816 1631 PRINTS Ankyrin repeat signature 715 729 IPR002110 GO:0005515
Dere07g1816 1631 Gene3D - 474 586 IPR036770 -
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat profile. 587 619 IPR002110 GO:0005515
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat profile. 518 551 IPR002110 GO:0005515
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 1506 1625 IPR040847 -
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 1054 1118 IPR040847 -
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 874 992 IPR040847 -
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 1124 1242 IPR040847 -
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 1377 1498 IPR040847 -
Dere07g1816 1631 Pfam Mind bomb SH3 repeat domain 1250 1371 IPR040847 -
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat region circular profile. 733 764 - -
Dere07g1816 1631 Gene3D - 774 863 IPR036770 -
Dere07g1816 1631 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Dere07g1816 1631 MobiDBLite consensus disorder prediction 87 106 - -
Dere07g1816 1631 FunFam E3 ubiquitin-protein ligase KEG 732 865 - -
Dere07g1816 1631 SUPERFAMILY RING/U-box 5 58 - -
Dere07g1816 1631 ProSiteProfiles Protein kinase domain profile. 140 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1816 1631 FunFam E3 ubiquitin-protein ligase KEG 232 448 - -
Dere07g1816 1631 ProSiteProfiles Ankyrin repeat profile. 766 798 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1816 Dere-ChrDere07 29387100 29402999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1816 145 457 MAP Kinase Kinase Kinase AT1G53570 24.398 8.07e-18 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Dere07g1816 Pkinase 4.6e-30 CL0016