Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1799 ATGTTCCTCAACAGGACAAAGAATCAATCTTTCCCACAAAATCTCTCGCCCCTCTCACTCCTGAAAATCTCTGAATTTGAAATGAGCATGTTAGGCCTGAGAGACCTACTCCTCATAGCTCCCACCCCTTCTTCTCTTCACCAGCAGCAACAGCCCCAACAGGACCATTCCAACCTTCAGCCTCTTCCTTCCTCTGCTTCTCTCAGCGTCGGCCTCGGCATTTTCCCTCTTCTTACTGCCACTCCCTGCGTCCCCAATGACCTCCCACAAGATTCCGCCGATCACAATCACAATCATAACAACACCCCCAGCAATCCCAATTTCTGGAACCTCAAGATGTGCCCGGAAGTCACGAATTCTGGGAAGAAGTGTCTAATCGACGTCGAGGGCGACGAGAATGGTATTTTTGGGGGTGATTTTAGGGTGTGTCAGGATTGTGGGAATAGGGCCAAGAAAGATTGTGGGTATAGAAGATGCAGGACTTGTTGCAAGGGACGTGGCTACGATTGCAGCACTCATCTCAAGAGCACATGGGTCCCCGCCGCACGCCGCCGCGAGCGCCAGATGACGGCGCTTGCGGCTGCTGCCGGAGGAGGCGATGGTGCTTCTGGGTCGTCTCCCGGTGCGAAGAGGCCGAGAGCTTGGGGGTCGTCGCAGAATGCTGCTACTACTTCTCATAGTTCTGCCTCCAACCCCACTACACCAAGAAGCTTGGATACTACCTCTTGTCACCAAGATGCTAGCTTCAAACAGTCTTTGCCAGGTCATGTTCGTGCTCCTGCAGTGTTCAGATGCCATAGAGTGTCGGCTATTGGTAATGGAGAAAATGAATTTGCGTACATGGCCACAGTGCATATTAGTGGCCATGTTTTCAAGGGGTTTCTGTATGATCAAGGTGCTGATGGGAAAAGTACAGTCCCTTGTGTTTCAGAACTTCAATTGGGTAACTATAGCAGTGAAAAGAACAGGGAATGTTCTTCTCCAATTGGGGTTCCTACTAATAGTGCCTACCCTGCTTCTGGCTGTTGA 1029 0.5092 MFLNRTKNQSFPQNLSPLSLLKISEFEMSMLGLRDLLLIAPTPSSLHQQQQPQQDHSNLQPLPSSASLSVGLGIFPLLTATPCVPNDLPQDSADHNHNHNNTPSNPNFWNLKMCPEVTNSGKKCLIDVEGDENGIFGGDFRVCQDCGNRAKKDCGYRRCRTCCKGRGYDCSTHLKSTWVPAARRRERQMTALAAAAGGGDGASGSSPGAKRPRAWGSSQNAATTSHSSASNPTTPRSLDTTSCHQDASFKQSLPGHVRAPAVFRCHRVSAIGNGENEFAYMATVHISGHVFKGFLYDQGADGKSTVPCVSELQLGNYSSEKNRECSSPIGVPTNSAYPASGC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1799 342 MobiDBLite consensus disorder prediction 193 245 - -
Dere07g1799 342 NCBIfam LRP1 C-terminal domain 253 299 IPR006511 -
Dere07g1799 342 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 75 327 IPR007818 GO:0003700|GO:0006355
Dere07g1799 342 Pfam Domain of unknown function (DUF702) 142 301 - -
Dere07g1799 342 MobiDBLite consensus disorder prediction 212 245 - -
Dere07g1799 342 NCBIfam putative zinc finger domain, LRP1 type 142 184 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1799 Dere-ChrDere07 29189497 29191007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1799 27 337 C2H2 Transcription Factor Family AT5G12330 41.379 3.48e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Dere07g1799 DUF702 5.4e-57 No_clan