Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1780 ATGGATATTTTCTTGCTACCCACACTACTTCTTTTCATCATCTTCATTGTGTCAAGCTTTTATTTGCATCAAAGGAAGCTCCTTGGCATCAAAAACCTTCCTCCAGGTAGTTATGGGTGGCCTCTTGTGGGGGAATCATACCGATTCCTCTTTAAGAAGCATGACCATTTTCTTAAAGAGAGGAGGAAAAAGTACTCCTCAGATATCTTCAAGACAAGCTTACTTGGGGAGCCAACAGTAATTATATGTGGTCCAAGTGCAAACAAACTTGTGTCCATGAGTGAGCCAAAGCTTGTCAAAGTTCATTACTTGAAAACCCAACACAGATTGTTCAGTATACCAAAGGCCAAGGATCATGAAGCTATACAAAAGGATGCTGAAAAAACAAAAGCAGCTGTAGCAGTTCCGGTGAAGATATTAGGGTTTCTAAAACCAGAAGGACTTATGAAGTACATGGGAGGGATTGAATCCATGATACAGCAACATTTCAGGACACATTGGGATGGCCAAAAGGAAGTAAAGGTCTATCCCTTGATGAAGGACTTCTCATTGAGACTGATCCTTCAATTCTACCTAGGCCTTGACAAGCCTGACAGTACTACTGTGGCCAAACTCGCCACTCTATTTGACGACTTGTTCTCTGGGATTTATTCGATCCCTGTGAATTTGCCTGGCACAACATATCATCGTGCGCAGAAAGCAGCATCAGAAATTCAAAAGGCGATTCAGATGATAATAAAAGAGAAGATCGATGCTTTGTCTGTGGGCTCTGAAGTGGAAAAAGACCTACTAACTTACATAGTTGGAGCCCAGCAAGATGGAAAGTATGTGCCAAAACTAGAAATAAGCAATGTAATTATGGGTATGATGAACTCAAGCTACACTTCTTTAGCCATTACCTTGTCCTTCATGATCAAGCACACTGGACAGAGCCCTGAAATCTACCACAAAATCCTATCTGCAGAACATACAGAAACAGCAAGATCAAGAGGAGGCAAAGCAGCACTTGATTGGGAAAGCATACAAAAAATGAAGTACACATGGGCTGTTGTACAGGAGACCATGAGACTCTACCCCACAGCGCCGGGTGCTTTCAGGGTGGCAGCAACAGACATCACCTTTGATGGATTCACTATTCCTAAGGGGTGGCAGATCTTTTGGGCGATTACAGCGACAAACATGGATCCCAAGTACTTTCGTGAGCCCGAAAAGTTCGATCCCTCAAGGTTTATTGAAGGAAATGGTCCTAGTCCATATACATTTATACCCTTTGGTGCAGGCGCAAGAACATGCCCAGGAATGGATTACGTACGCTTTGCAGTTCTGGCCTTCATTCACAGTCTTGTGACCAACTTCAAATGGCAGCTTGTGTTTCCACATGAACCAGTTTTTGGTGCTTTGGTGCCTTTTCCAGCACAGGACATTCCCATTCGTCTTAACCAGCTTTAG 1449 0.432 MDIFLLPTLLLFIIFIVSSFYLHQRKLLGIKNLPPGSYGWPLVGESYRFLFKKHDHFLKERRKKYSSDIFKTSLLGEPTVIICGPSANKLVSMSEPKLVKVHYLKTQHRLFSIPKAKDHEAIQKDAEKTKAAVAVPVKILGFLKPEGLMKYMGGIESMIQQHFRTHWDGQKEVKVYPLMKDFSLRLILQFYLGLDKPDSTTVAKLATLFDDLFSGIYSIPVNLPGTTYHRAQKAASEIQKAIQMIIKEKIDALSVGSEVEKDLLTYIVGAQQDGKYVPKLEISNVIMGMMNSSYTSLAITLSFMIKHTGQSPEIYHKILSAEHTETARSRGGKAALDWESIQKMKYTWAVVQETMRLYPTAPGAFRVAATDITFDGFTIPKGWQIFWAITATNMDPKYFREPEKFDPSRFIEGNGPSPYTFIPFGAGARTCPGMDYVRFAVLAFIHSLVTNFKWQLVFPHEPVFGALVPFPAQDIPIRLNQL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1780 482 CDD CYP90-like 61 479 - -
Dere07g1780 482 PANTHER CYTOCHROME P450 26 32 463 - -
Dere07g1780 482 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 Pfam Cytochrome P450 34 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 Gene3D Cytochrome P450 25 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 FunFam Taxadiene 5-alpha hydroxylase 24 482 - -
Dere07g1780 482 SUPERFAMILY Cytochrome P450 31 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere07g1780 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1780 Dere-ChrDere07 28823980 28828524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1780 32 385 Cytochrome P450 AT5G36110 31.233 2.23e-62 206