LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g1755	ATGGCGAGTGAGAAGAAGCTTATTATGGGATGTTGTGGAAGGTTCATTGAGACCTCAAAACCCTACTTTGCGATGATCTCTTTACAGTTTGGGTATGCAGGCATGAACATTATCACTAAGGTTTCTCTGAACCAAGGCATGAGCCACTATGTGCTTGTGGTTTATCGCCATGCCTTTGCCACTGCTGTTATTGCTCCTTTTGCCTTCATTTTTGAAAGGAAAGCTCAACCAAGGATAACATTCCCAATTTTCTTGCAAATTTTCATCCTTGCACTCCTTGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAATTAACATCGCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCTATGACATTTGTGATGGCTGTTTTATGCAGGATGGAAAAAATTGACATGAAGGCGGTGAGGTGTCAAGCAAAGATAGTGGGGACAATAGTGACAGTGGGTGGGGCCATGGTGATGACACTGTACAAAGGTCCTATTATGGAGATGTTTTGGTCCAAACACTCTCATTCCCATCGTTATTCCCACGACACTACAAATCCAAGAAGCAATTCCACCGATGCTGATTCCTCAGACAAAGAGTGGTTCATAGGCTCCATCTTCATCATCATTGCCACTTTTGCCTGGGCTTCCCTTTTTGTTTTACAAGCAAAAGCCTTGGAAACATATAAGAATCATCAGCTAAGCCTCACATCACTAGTGTGCTTCATAGGAACTCTTCAAGCCGTTGTTGTTACTTTTGTCATGGAACATGACCCTTCTGTGTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCCTATGCTGGGATTGTGACTTCAGGTATATCATACTATGTTCAAGGATTGGTGATGAAGAAAAAAGGACCTGTCTTCGCAACTGCCTTTAGCCCTTTGATGATGATTGTTGTCGCCATCATGGGCTCCTTCATCCTTGCAGAAAAAATTTATCTTGGAGGTGTGATTGGAAGCATCTTAATAGTGATTGGATTGTACTCAGTTCTGTGGGGAAAACACAAAGAAAGAGTGGAAAGCAAAGTGGGAGAGGATGATGATAAAGCATTGCCCATGAAGGTCTCTCAGCTTGATCATCCAAATGTTGCAGATGAACTTCTTAATAATAACAATAATGCACCAAAATCACAGAAAGCCGAAGCCATTCTCATTAGCATGCCTAAACCCAACAACAACACAGACCTAAAAGCTTAA	1236	0.4223	MASEKKLIMGCCGRFIETSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFPIFLQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVLCRMEKIDMKAVRCQAKIVGTIVTVGGAMVMTLYKGPIMEMFWSKHSHSHRYSHDTTNPRSNSTDADSSDKEWFIGSIFIIIATFAWASLFVLQAKALETYKNHQLSLTSLVCFIGTLQAVVVTFVMEHDPSVWRIGWDMNLLAAAYAGIVTSGISYYVQGLVMKKKGPVFATAFSPLMMIVVAIMGSFILAEKIYLGGVIGSILIVIGLYSVLWGKHKERVESKVGEDDDKALPMKVSQLDHPNVADELLNNNNNAPKSQKAEAILISMPKPNNNTDLKA	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g1755	411	Pfam	EamA-like transporter family	205	344	IPR000620	GO:0016020
	Dere07g1755	411	Pfam	EamA-like transporter family	21	161	IPR000620	GO:0016020
	Dere07g1755	411	PANTHER	WAT1-RELATED PROTEIN	21	356	IPR030184	GO:0016020\|GO:0022857
	Dere07g1755	411	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	244	349	-	-
	Dere07g1755	411	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	55	164	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g1755	Dere-ChrDere07	27820140	27825237	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g1755	12	373	Nodulin-like Gene Family	AT5G07050	71.123	0.0	538