Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1751 ATGAGGAAGAAGCTTGATACCCGTTTTCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAAGATATTGGAAAAATAGCACTAGCAGTGCCTGTTTTAGTTTCCAAAGCTCTTGAATTATTTTTGCAAGATCTTTGTGACCATACTTATGATATAACTCTTCGTAGAGGAGCAAAGACCATGAGTGCATTGCATTTAAAGCATTGTGTACAAAGCTATAATGTCTTTGATTTCCTGAGGGATATCGTGAGCAGGGTGCCTGACTATGGTCATGGGCATGGGCATGGCCATTCTGAATCTGGTGCTGATGATCGAGCTGTTTCAAAGAGAAGGAAAGCAGCAGGTGATAATTGCAATGACAGTGACGAGGAGTCTAAGAGGAGCAAGATGCATGAGTTGAACCACACTGGCAGTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGCGGTCGTGGTGCTCGAGCTGTTGAAAGACAGACTCATTATCAGGAGGTTGAACCTGGGCCTTGCACTTTTGTTCAGCACAGCAGCAAACATGATCCTAACACAAGTGTGGTAATAGACAATGGTTCAGAGTTGAAAGAGTCACCCGTAGAGAATACTACAGTTCCTAGTGAAGGCTTTCAGAATCCCAGTAACATTGATTTGAATGCCAACGCAAATGAAAATGATGCAAAAATTGCTAACACAGCAGCTCATGTCTCGTTGCCTGAACCTGCAACTGAGACTAAACATGAAGAAATCCCAGGCTGGTCTATTTCTGATGTTGACAAGATGGCCATTGACTCTATGCAGCTTGCACAGCTTGGGAGACGATTAGAAGAGGATGAGGAAGATTATGACGAGGAAGGGTAA 864 0.4433 MRKKLDTRFPAARIKKIMQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLRRGAKTMSALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHSESGADDRAVSKRRKAAGDNCNDSDEESKRSKMHELNHTGSTGRGRGRGRGRGRGRGARAVERQTHYQEVEPGPCTFVQHSSKHDPNTSVVIDNGSELKESPVENTTVPSEGFQNPSNIDLNANANENDAKIANTAAHVSLPEPATETKHEEIPGWSISDVDKMAIDSMQLAQLGRRLEEDEEDYDEEG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1751 287 MobiDBLite consensus disorder prediction 91 139 - -
Dere07g1751 287 Coils Coil 269 287 - -
Dere07g1751 287 MobiDBLite consensus disorder prediction 91 165 - -
Dere07g1751 287 FunFam dr1-associated corepressor homolog 1 86 - -
Dere07g1751 287 SUPERFAMILY Histone-fold 4 90 IPR009072 GO:0046982
Dere07g1751 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Dere07g1751 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Dere07g1751 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1751 Dere-ChrDere07 27725569 27728785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1751 1 276 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.690 6.17e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere07g1751 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1751 07 27725569 27728785 Dere07g1751 07 27725569 27728785 ECH