Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1740 ATGAGACTCAGATGCTCATTCTTCCTCTATTTCTTCTTCTTGCACTTTCTTCTCTTCTCAGCAAGCTCTGGTTCGAACAAAGTTATTGCAGCACAAAGTACAGGGTCACTTGATTATCGCTATGCTTGTTTGGACCAAAGTGGGGTCACCCCATCGAGCAAATACCAGAGCAACGTCAAGAGTCTCTTCGCTTCGCTTTCCTCTGATGCTTCAGGCAGCAATGGATTTGAGAATAGAAGTGCAGGTGGTGATGATGGTGACAAGAGCAGTATGGTTTATGGGCTTTACCTTTGCAGAGGGGATGTGAATAGCAGTATATGTCATTCTTGTGTTGAAAACTCTAGCAGATTGATCCAACAACACTGTCCCAACAATGCTTCAGCCGTTTTATGGTACCCATTTTGCCTTCTCAGGTACTCAAACCAGGATTTCTTCGGCAAACTCACTGTAACGCCAAGGATTCCCATGCTTGATGCAGCACAGAACTTCACAAGTGCTGGAGAGTTTGATAGTGATGCTAGGATTCTGATGAATGGTTTGATACAGACTGGTGCAGAGACTGAATTAATGTTTGGGACACACATGTTCAACATAAATGGCACCCAGAAAAGGTACGGTTGGGTGCAGTGCAGCAGAGACATTACTAGTGAGGAATGCAGGACATGTCTGAGCAATATGCTTGAAGATGTTGAGAATTGCTGTGAAGACAGGAGGGTTTGGAGAATCTTTTCTCCTAGTTGTATTGTCATGTATGAGACTCAACCTTTCTTTGTAAACAACACAGCATCAGTTCCACCAATGCCCCAGCCAGGCAAAGAAAGTAATGACAGAAGGTCAATGCTTATAGTTATCATAGTTGTAAGTGTAGTAGTAGTACAAGCCCTACTGGTTTTCTGCATAGTATACTTTAGGTGCTTGAAAAGGAGAAAAGACAAACAAGCTATGCAGGACGATGGGCTAAATCCAGTATTTTCTCATGACCAAACTGATGGAGAGGATTCTATGAATGCTGACCTTCCTATGATGCCCCTGAAAATTATTCTACAAATTACTTGTAACTTTTCTGATGAATATAAATTGGGACAAGGTGGATTTGGCCCTGTTTACAAGGGTGTTTTACCTGATGGGAAGCAAATAGCAGTTAAGAGGCTCTCAAAAACTTCAGGTCAAGGATTAAAGGAGTTTAAGAACGAAGTGATCTTGATTGCAAAATTGCAGCATCGGAACCTTGTGAGATTGATAGCTTGCTGCATTGAGCAAAATGAAAAGCTGCTTGTGTATGAGTACATGCCCAATTCTAGCCTTGATTTTCATCTATTTGATACAGAGATGCGTTCAAAGCTGGACTGGAAACTGCGTTTAAGCATCATTAGTGGGATTGCAAAAGGGATTTTGTATCTTCATGAAGATTCTAGATTAAGGGTTATTCACAGAGATCTAAAAGCCAGCAATATTTTATTAGATCATGAAATGAATCCAAAAATTTCAGATTTTGGATTGGCAAGAGCTTTCGGAGGAGACCAGAGGCAGGCAAACACAATAAGAGTTGTGGGTACATACGGATATATGGCTCCAGAGTATGCTATGGAAGGTTTATTTTCAGTAAAGTCTGACATTTTTAGCTTTGGTGTTCTTCTGCTTGAGATCATTAGTGGAAAAAAGAACAGTGGATTCTATCTCTCAGAGCACGGTCAAAGCCTTCTCATATATGCATGGAGGCTGTGGTGTAATGGAAAAGGCTTGGAATTCATGGATCCATTACTAGAAAGGTCATGTGAACCTTCTGAAGTTCTCAAGTGTATCCACATTGGCCTACTGTGTGTTCAAGAAGATGCAGCAGATAGACCTACGATGTCAAGTGTTGTACTCATGCTTGCAAGTGACTCAGTTTCCCTTCCAAAGCCAACACAGCCAGCATTTTCTGTTGGAAGGCTTTTCATGGAAAAAGGGTCTTCATCAAACCATTCTATTCTGGACTCTATCAATCAAGTAACAGTTTCTGAAGTTGGACCTAGGTGA 2019 0.4136 MRLRCSFFLYFFFLHFLLFSASSGSNKVIAAQSTGSLDYRYACLDQSGVTPSSKYQSNVKSLFASLSSDASGSNGFENRSAGGDDGDKSSMVYGLYLCRGDVNSSICHSCVENSSRLIQQHCPNNASAVLWYPFCLLRYSNQDFFGKLTVTPRIPMLDAAQNFTSAGEFDSDARILMNGLIQTGAETELMFGTHMFNINGTQKRYGWVQCSRDITSEECRTCLSNMLEDVENCCEDRRVWRIFSPSCIVMYETQPFFVNNTASVPPMPQPGKESNDRRSMLIVIIVVSVVVVQALLVFCIVYFRCLKRRKDKQAMQDDGLNPVFSHDQTDGEDSMNADLPMMPLKIILQITCNFSDEYKLGQGGFGPVYKGVLPDGKQIAVKRLSKTSGQGLKEFKNEVILIAKLQHRNLVRLIACCIEQNEKLLVYEYMPNSSLDFHLFDTEMRSKLDWKLRLSIISGIAKGILYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARAFGGDQRQANTIRVVGTYGYMAPEYAMEGLFSVKSDIFSFGVLLLEIISGKKNSGFYLSEHGQSLLIYAWRLWCNGKGLEFMDPLLERSCEPSEVLKCIHIGLLCVQEDAADRPTMSSVVLMLASDSVSLPKPTQPAFSVGRLFMEKGSSSNHSILDSINQVTVSEVGPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1740 672 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 321 429 - -
Dere07g1740 672 FunFam Cysteine-rich receptor-like protein kinase 28 39 143 - -
Dere07g1740 672 Pfam Protein tyrosine and serine/threonine kinase 358 623 IPR001245 GO:0004672|GO:0006468
Dere07g1740 672 FunFam Uncharacterized protein 430 631 - -
Dere07g1740 672 Gene3D Phosphorylase Kinase; domain 1 320 429 - -
Dere07g1740 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Dere07g1740 672 ProSiteProfiles Gnk2-homologous domain profile. 151 256 IPR002902 -
Dere07g1740 672 Gene3D Transferase(Phosphotransferase) domain 1 430 633 - -
Dere07g1740 672 ProSiteProfiles Gnk2-homologous domain profile. 37 144 IPR002902 -
Dere07g1740 672 ProSiteProfiles Protein kinase domain profile. 354 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1740 672 CDD STKc_IRAK 360 625 - -
Dere07g1740 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 665 - -
Dere07g1740 672 SUPERFAMILY Protein kinase-like (PK-like) 338 648 IPR011009 -
Dere07g1740 672 FunFam Cysteine-rich receptor-like protein kinase 10 154 256 - -
Dere07g1740 672 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1740 672 Gene3D - 37 144 IPR038408 -
Dere07g1740 672 Gene3D - 156 256 IPR038408 -
Dere07g1740 672 Pfam Salt stress response/antifungal 48 142 IPR002902 -
Dere07g1740 672 Pfam Salt stress response/antifungal 161 253 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1740 Dere-ChrDere07 27636421 27641940 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1740 41 672 Receptor kinase-like Gene Family AT4G05200 40.244 6.10e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g1740 PK_Tyr_Ser-Thr 3.3e-46 CL0016