Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1728 ATGGGATTATCAAGAATCATTACAACTCTGGGGTTTCTGATGAGCTTCACAGTTCTGAGTTTCACAAAAACAAGCGCCGCTCAAGCCCCAAACTATGTTGGAGATGACTGCCATAACTCAACCCCACAAGCCCTATCTGCTTCATACCGAACCAACCTTGACAAGGTCCTCTCATGGCTGTCCAGCGACGCAGCCACAAGCAAAGGCTACAACCACACCGCCATCGGCAACCGCAACGACGCCGCTTACGGCCTCTACGATTGCCGCGGCGACGATGCCGGATACTTCTGCCAGTTCTGCGTCTCCACCGCCACCAGAGAGGTTCTCCAACGTTGTGCCGATCGACCTTCTGCTGTAATATGGTACGATTTCTGCATCCTTCGATACTCCGACAAGAACTTCTTCGGGAACGTGACGACGAGCCCATGGTGGTTTGCCAGGGGAACGAAGAAGGTGTCGGATTCGACGGAGCCGAGGAAGGCAGAGAGTTATATGAGGAGTCTGATAGGTAGAGCGACGAAGGAGACGAAGCAGTTGTATGCCATGGGAGGCTTTGATTTGGGTGGTGGAAAAAGGTATGGGTTGGTGCAGTGCAGCAGAGACCTCAGTGACCAAGGTTGCAGGCAGTGCTTGGAGGCTATGGTGGATAAGGTTCCTCAGTGCTGTGAGCAGAAGCAAGGATGGCAGGTTTTGGCTCCCAGTTGTCTCATCAAGTACGATGATTATATGTTTTATCAGCTCGCTGGCAATCAGACATCATCGTCTTCTCTGAATCCTGCTCCCAGTCGTACGACAGGCAGTAAAAATGGTGTTAGCAAGTTAAAAGCCCTGATCATAAGCATAAGTGTATTAGTAGCTGTAGCTATATTAAGTTGCTCTGTCTACTTCTGGCGAAGAAAGAATGGGTCTAGAAAAGATGAACTGTTGTCGGAGACGAGTCCTATGTTTTATGACTTATCTCAAAGAGAGAGTTCATTGAACACAGACCTTCCAACAATCCCTTTAATTGTGATTCAACAAATCACTAATCACTTTTCAGAAGCATATAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAACATTGCCAGATGGGAGGGAAATTGCTGTAAAAAGGCTCTCTAAAACTTCAGGGCAAGGCTTAGAGGAGTTCAAGAATGAAGTGATATTCATAGCAAAGTTGCAACATAGAAACCTTGTTAGACTCTTGGGTCGCTGCATAGAGGAAAATGAGAAGCTACTTGTATATGAGTACATGCCAAATTCCAGCCTTGACTTCCACCTTTTCAACAAGGCAAATACAAAGAAACTAGATTGGAAGCAAAGACTAACATGGTCAAAGTCTTCTTATTTATACTTGGAGACTGTGGTGTGA 1380 0.4645 MGLSRIITTLGFLMSFTVLSFTKTSAAQAPNYVGDDCHNSTPQALSASYRTNLDKVLSWLSSDAATSKGYNHTAIGNRNDAAYGLYDCRGDDAGYFCQFCVSTATREVLQRCADRPSAVIWYDFCILRYSDKNFFGNVTTSPWWFARGTKKVSDSTEPRKAESYMRSLIGRATKETKQLYAMGGFDLGGGKRYGLVQCSRDLSDQGCRQCLEAMVDKVPQCCEQKQGWQVLAPSCLIKYDDYMFYQLAGNQTSSSSLNPAPSRTTGSKNGVSKLKALIISISVLVAVAILSCSVYFWRRKNGSRKDELLSETSPMFYDLSQRESSLNTDLPTIPLIVIQQITNHFSEAYKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGRCIEENEKLLVYEYMPNSSLDFHLFNKANTKKLDWKQRLTWSKSSYLYLETVV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1728 459 Pfam Protein tyrosine and serine/threonine kinase 349 447 IPR001245 GO:0004672|GO:0006468
Dere07g1728 459 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 445 - -
Dere07g1728 459 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 311 420 - -
Dere07g1728 459 Gene3D Phosphorylase Kinase; domain 1 312 420 - -
Dere07g1728 459 FunFam Cysteine-rich receptor-like protein kinase 28 33 133 - -
Dere07g1728 459 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Dere07g1728 459 Pfam Salt stress response/antifungal 159 242 IPR002902 -
Dere07g1728 459 SUPERFAMILY Protein kinase-like (PK-like) 320 448 IPR011009 -
Dere07g1728 459 ProSiteProfiles Gnk2-homologous domain profile. 140 244 IPR002902 -
Dere07g1728 459 Gene3D - 147 244 IPR038408 -
Dere07g1728 459 Gene3D - 31 134 IPR038408 -
Dere07g1728 459 ProSiteProfiles Protein kinase domain profile. 345 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1728 459 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1728 Dere-ChrDere07 27382235 27387641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1728 13 444 Receptor kinase-like Gene Family AT4G05200 37.892 3.31e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g1728 PK_Tyr_Ser-Thr 3.8e-15 CL0016