Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere07g1726 | ATGCTTAATGAAGACAAAGGCACTTTGTTGACAGCCAAGGTGATTTCTTCCAAAGACAATGATGACCCAAGCAAAGATGAACCTAAGTTGAATGATCCTGAAGATAAACCGAATAGAACCCAGCCAATGAAAAGGAATCCAACATATAAGGGAAAATGGCATGCTCCTCTTATTGATAACCCCAATTATAAAGTTTCAAGTTTTGGTGAACAAAATGTGCTTATCTTCGACCTGGGAGGTGGTACTTTTAATGTTTCTCTACTCACAATTGAAGAGAAGATTTTCAAAGTGAAGGCAACTGGTGGTGGTGCACACTTAGGAAGTGAAGATTTTGACAATAGACTTGTGAATCACTTGGTATTAGAGTTCAAAAGGAAAAACAATAAGGAGTATTTAAATGGACTTGATAAGGCTGTCAGTGTTGTCTTAGGGGAAAGAACCATTGAGATTAATCACTTGTTGGTTAGGGTTGCAAAAAGTAAGGGTGTGCATTGA | 495 | 0.3778 | MLNEDKGTLLTAKVISSKDNDDPSKDEPKLNDPEDKPNRTQPMKRNPTYKGKWHAPLIDNPNYKVSSFGEQNVLIFDLGGGTFNVSLLTIEEKIFKVKATGGGAHLGSEDFDNRLVNHLVLEFKRKNNKEYLNGLDKAVSVVLGERTIEINHLLVRVAKSKGVH | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere07g1726 | 164 | Gene3D | Actin; Chain A, domain 4 | 107 | 138 | - | - | |
Dere07g1726 | 164 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Dere07g1726 | 164 | Pfam | Hsp70 protein | 69 | 130 | IPR013126 | GO:0005524|GO:0140662 | |
Dere07g1726 | 164 | SUPERFAMILY | Actin-like ATPase domain | 70 | 133 | IPR043129 | - | |
Dere07g1726 | 164 | Gene3D | - | 67 | 106 | - | - | |
Dere07g1726 | 164 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 75 | 88 | IPR018181 | - | |
Dere07g1726 | 164 | MobiDBLite | consensus disorder prediction | 18 | 41 | - | - | |
Dere07g1726 | 164 | Pfam | Calreticulin family | 40 | 64 | IPR001580 | GO:0005509|GO:0005783|GO:0006457|GO:0051082 | |
Dere07g1726 | 164 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 63 | 139 | IPR013126 | GO:0005524|GO:0140662 | |
Dere07g1726 | 164 | Gene3D | Calreticulin/calnexin, P domain | 40 | 62 | IPR009033 | GO:0005509|GO:0005515 | |
Dere07g1726 | 164 | SUPERFAMILY | P-domain of calnexin/calreticulin | 27 | 64 | IPR009033 | GO:0005509|GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere07g1726 | Dere-ChrDere07 | 27329455 | 27330443 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere07g1726 | 64 | 130 | Calmodulin-binding Proteins | AT3G12580 | 77.612 | 5.36e-29 | 109 |