Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1703 ATGGCTTCCGTAGCATCCACACAGGTTCTATTGCATAATGCCCTTTTACATAATCACCAAGCAACAAGATTCCTTGGAGCCCAAAGCACTAGCACCAGTGCTCTGGCTCTCCGGGTTCGAGCCTCGCAGACGTCAGAGGGCCCTCGCAAGCGCCAGAGACCACCTCCTGGAATGGACACAAGAATCCATTGGGACAACGAAGACGAAGGTTGGATTGGAGGCACCAATAACAACAGTAAACAATCCAGCGCAGAGAATGACCCTAAGAATCTGCTGGGCCAAAATCTTGCCGATTTGCTTTCTGATTCTTCTGGCTCTCATTACGAATTTTTAGGAGTATCAGCAGAAGCTGATTTAGAAGAGATTAAAGCAGCTTACAGGAGATTATCAAAGGAATACCACCCAGACACAACTTCGCTCCCTCTGAAAACTGCCTCAGACAAATTCATGAAGCTGAGAGAAGTTTACAATGTCCTGAGCAATGATGAGAGTCGAAGATTCTATGATTGGACATTAGTTCAAGAGGCTGCGAGCCGGCAATCGGAGAAGATGAAGGTAAGATTGGAGGACCCTTATGAGCAAGATGTGAAGAACTGGGAATCTGTTCCCGACATGGTTGATCGGCTTGGAGGAAGGAATTTGAAGCTTAGTGATCAAGCAGTGACTGCTCTCACTGTTGATATTTTCATCATTATTTTTGCCATTTGCTGCATCATTTATGTAATATTCTTTAAAGAACCTTATTACTAG 750 0.448 MASVASTQVLLHNALLHNHQATRFLGAQSTSTSALALRVRASQTSEGPRKRQRPPPGMDTRIHWDNEDEGWIGGTNNNSKQSSAENDPKNLLGQNLADLLSDSSGSHYEFLGVSAEADLEEIKAAYRRLSKEYHPDTTSLPLKTASDKFMKLREVYNVLSNDESRRFYDWTLVQEAASRQSEKMKVRLEDPYEQDVKNWESVPDMVDRLGGRNLKLSDQAVTALTVDIFIIIFAICCIIYVIFFKEPYY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1703 249 PRINTS DnaJ domain signature 126 141 IPR001623 -
Dere07g1703 249 PRINTS DnaJ domain signature 144 164 IPR001623 -
Dere07g1703 249 PRINTS DnaJ domain signature 108 126 IPR001623 -
Dere07g1703 249 Pfam DnaJ domain 107 169 IPR001623 -
Dere07g1703 249 Coils Coil 112 132 - -
Dere07g1703 249 SMART dnaj_3 105 164 IPR001623 -
Dere07g1703 249 MobiDBLite consensus disorder prediction 44 68 - -
Dere07g1703 249 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Dere07g1703 249 MobiDBLite consensus disorder prediction 71 90 - -
Dere07g1703 249 ProSitePatterns Nt-dnaJ domain signature. 149 168 IPR018253 -
Dere07g1703 249 SUPERFAMILY Chaperone J-domain 103 172 IPR036869 -
Dere07g1703 249 Gene3D DnaJ domain 95 192 IPR036869 -
Dere07g1703 249 CDD DnaJ 107 161 IPR001623 -
Dere07g1703 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 248 IPR044618 -
Dere07g1703 249 MobiDBLite consensus disorder prediction 38 90 - -
Dere07g1703 249 FunFam DnaJ homolog subfamily C member 4 95 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1703 Dere-ChrDere07 26945932 26947398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1703 107 169 C2H2 Transcription Factor Family AT1G74250 40.299 3.86e-08 51.6