Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1660 ATGGCTGCTCTTAGTGGCACCACTGCTTCTTTTCGCATTATCATCCCCTCCAGCACCGGAGCGTCCAACTCTCTTGCGTCTTCCTCTCGTTACTTATCTTCCTCTTTGAAGGGCAGAGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAAGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAGCTGAAACATGCAGCAAATGTTAGACTTGTTAATGCATTGAAGCTTCTTCAACCAATCAAAGACAAGTACTATGGTGTTACATATGCAAATTTATTTCAGTTGGCTGCTACTACTGCTATGGAGGAGGTTGGTGGCCCAATAATCCCTATGAAGTATGGAAGAGTGGATGTTTCAGGACCTGAACAATGTCCTGAAGAAGGGAGACTTCTTGATGCTGGCCCCCCTTCTCCTGCTGATCATTTACAGCAAGTGTTTTACAGAATGGGTTTGAATGACAAGGAAATAGTTGCACTATGTGGTGCACACAAGTTGGGTCGATCTAGACCAGAACGCAGTGGCTGGGGCAAGCCAGAGACCAAGTATACGATCCGAGACCATCATATGAAACAAATGAAAGAAAGAAGAAGACAGATGACGAAGGGAGAGAGAGTAGAGAATAGGGAGATTGAGCTGAGAATTGGGCAAGAGGAAGAGGAGCCACTCTGCATACCCCTATTTTTGAAGCCTAAAACAGAGAAGGCAGTGATCTTGGAGCCAAATGACGATGGAGTCAATAAGGAACTTGTTGCTGCTACTTGCTCTACTTCATCTACCTATGTGCATATTGGCTGCATGAAGACACGTGAATAG 837 0.4468 MAALSGTTASFRIIIPSSTGASNSLASSSRYLSSSLKGRGWHDAGTYNKSIEEWPQRSGANGSLRFEVELKHAANVRLVNALKLLQPIKDKYYGVTYANLFQLAATTAMEEVGGPIIPMKYGRVDVSGPEQCPEEGRLLDAGPPSPADHLQQVFYRMGLNDKEIVALCGAHKLGRSRPERSGWGKPETKYTIRDHHMKQMKERRRQMTKGERVENREIELRIGQEEEEPLCIPLFLKPKTEKAVILEPNDDGVNKELVAATCSTSSTYVHIGCMKTRE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1660 278 PRINTS Haem peroxidase superfamily signature 95 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Haem peroxidase superfamily signature 163 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Haem peroxidase superfamily signature 113 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 Gene3D Peroxidase, domain 2 141 210 - -
Dere07g1660 278 ProSiteProfiles Plant heme peroxidase family profile. 95 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Plant ascorbate peroxidase signature 94 112 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PRINTS Plant ascorbate peroxidase signature 113 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 Gene3D - 40 140 - -
Dere07g1660 278 Pfam Peroxidase 41 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 SUPERFAMILY Heme-dependent peroxidases 39 186 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere07g1660 278 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 33 185 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1660 Dere-ChrDere07 25555086 25556200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1660 95 177 Peroxidase AT1G14550 36.905 1.15e-07 50.4