Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1637 ATGGAGGGTCCTCCTGCCAACGATCTTTGTTCGGTGTGCCATGGAAACTTCAACATTCCTTGCCAAGCCAATTGCTCCCACTGGTTTTGCGGAAGTTGTATCATGCTCGTATGGCGCCATGGATCAGCTGTCCAGCCATGTAAATGCCCCCTTTGTCGTCGTCAAATTACTTTGCTGGTTCCAACTGACGACTCTTTAAGGCAGCGTCATGACCCTGAAGTTGCTCAGGTTCTAGGAAATGTTGAAACATATAATCGTATATTTGGTGGTCAGGCTACTGGCCTTGTTCAGAGAATGCAAGATCTCCCTTTTCTCTTGCAAAGGCTATTGCGGGAAATGATGGATCCTCACAGAACCCTTCCTTTTGTTATTAGGGCTCGAGTCTATATTGCAGTTAAGTACATATTTGCAAGAAGGAAAAGGAATAAAGAAACTTACATTTGTCATGTAGAGGATGGGATCATAGCCTAG 471 0.448 MEGPPANDLCSVCHGNFNIPCQANCSHWFCGSCIMLVWRHGSAVQPCKCPLCRRQITLLVPTDDSLRQRHDPEVAQVLGNVETYNRIFGGQATGLVQRMQDLPFLLQRLLREMMDPHRTLPFVIRARVYIAVKYIFARRKRNKETYICHVEDGIIA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1637 156 SMART ring_2 10 52 IPR001841 -
Dere07g1637 156 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Dere07g1637 156 CDD RING-HC_RNF113A_B 4 61 - -
Dere07g1637 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 101 IPR013083 -
Dere07g1637 156 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Dere07g1637 156 SUPERFAMILY RING/U-box 8 60 - -
Dere07g1637 156 PANTHER UNCHARACTERIZED 2 132 IPR038896 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1637 31 132 C3H Transcription Factor Family AT1G22510 73.529 2.57e-49 155