Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1628 ATGGCCCATGAAGATTCAGACGCTGCTCCGCCTGTAACAGAGACGAAAGACTCATCGCCGGCGAAGGTCACAGCGGAGTCCGATTCACACACTACAGCAACTACCTCTGCTGTGGAATCCAACAACACGATGGCGGACAATACTGAAAACACTGACCTGCCGCAGCCGCCGCCTCCAGCGACGGAGCCACCGGCAGAGGAAGAAGCTACGGTGGTGGAGAAAGAGCCCCCGCTGCCAACCACAGAGGAAGCTAAAAGTTCAGATGCCAAAGAGGATGTCGTTGTGGTTCAGGATGAGAGATCGAAGAGTGTCGAAGAGCATAAGGTTCCGCAGAATCTGGTCTCGTTTAAGGAAGAGAGCAACAAAGTGGCTGATCTCTCGGATTCTCAGAGAAATGCTCTTGAGGAGTTGAAGCAGCTGGTTCGAGAGGCACTATACACTCACCAGTTCACTTCTCCAGTACCACCCAAAACGACGTCGGTGCCCGCTGAAACCACTTCAGCAGCTAAGGAAGCTGCGAAAGCTGAAGGAGGCAGTTCGGAGTCAGATGCTAGCACTGAGGTAAAACCTCCACAGGAAGCCAAAATTGAAGAAAACCCAGTGAAGGAAGCTGAGCAAGTAGCGAAAGAAACATCCGAGGAACAGGTTTCCATATGGGGAATTCCTCTGCTCAAGGATGACAGGAGTGATGTGATTCTGCTGAAGTTTCTTAGGGCCCGAGACTTCAAAGTGAAGGATGCGTTTGTCATGATTAAGAACACAATAAGCTGGAGGAAAGAGTTCAACATCGAGGCGCTTGTGAATGAAGATCTTGGAGATGATCTGGAGAAAGTGGTGTTCATGCACGGATACGATAGAGAAGGGCATCCTGTTTGTTATAATGTCTACGGAGAGTTTCAGAACAAGGAGTTGTATCAGAAGACATTCTCGAATGAGGAAAAACGAGCCAAGTTCCTCCGATGGCGGATACAATTCTTGGAGAGGAGTATTAGGAAGCTTGACTTTAGTCCTGGCGGTATCAATACCATTTTTCAAGTTAATGACCTTAAAAATTCTCCTGGGCCGGGAAAGCGGGAGCTTCGGATTGCCACCAAACATGCTTTGCAATTGCTTCAGGATAATTATCCCGAGTTTGTTGCCAAACAGGTTTTTATCAACGTACCATGGTGGTATCTTGCATTCTATACGATGATCAGTCCATTCTTGACACAGAGGACCAAAAGCAAATTTGTTTTTGCAGGCCCATCGAAGTCCGCTGAAACACTATTCAAGTATATTTCTCCTGAACAAGTGCCAATTCAATATGGTGGGCTAAGTGTAGATTTCTGTGACTGCAACCCAGAATTTAGCATGTCCGATCCAGTCACGGAGATACCTATAAAGCCAACCACCAAGCAAACTGTAGAAATCATTATTTATGAGAAATGCGTTATTGTTTGGGAGCTGCGAGTCGTTGGCTGGGAGGTTAATTATAGTGCTGAATTCAAGCCCGATGCAAGTGATGGATATACAGTTATTATACAGAAGGCCACAAAGATGTCCCCAACTGATGAACCAGTGGTTTCTACTAGCTTTAAAGTTGGTGAACTGGGCAAAATATTGCTTAACATTGACAATCCAACCTTGAAAAAGAAGAGGCTTCTGTATAGGTTCAAGATCAAACCTCTCAATGATTGA 1677 0.4621 MAHEDSDAAPPVTETKDSSPAKVTAESDSHTTATTSAVESNNTMADNTENTDLPQPPPPATEPPAEEEATVVEKEPPLPTTEEAKSSDAKEDVVVVQDERSKSVEEHKVPQNLVSFKEESNKVADLSDSQRNALEELKQLVREALYTHQFTSPVPPKTTSVPAETTSAAKEAAKAEGGSSESDASTEVKPPQEAKIEENPVKEAEQVAKETSEEQVSIWGIPLLKDDRSDVILLKFLRARDFKVKDAFVMIKNTISWRKEFNIEALVNEDLGDDLEKVVFMHGYDREGHPVCYNVYGEFQNKELYQKTFSNEEKRAKFLRWRIQFLERSIRKLDFSPGGINTIFQVNDLKNSPGPGKRELRIATKHALQLLQDNYPEFVAKQVFINVPWWYLAFYTMISPFLTQRTKSKFVFAGPSKSAETLFKYISPEQVPIQYGGLSVDFCDCNPEFSMSDPVTEIPIKPTTKQTVEIIIYEKCVIVWELRVVGWEVNYSAEFKPDASDGYTVIIQKATKMSPTDEPVVSTSFKVGELGKILLNIDNPTLKKKRLLYRFKIKPLND 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1628 558 SMART sec14_4 273 440 IPR001251 -
Dere07g1628 558 Pfam CRAL/TRIO, N-terminal domain 212 253 IPR011074 -
Dere07g1628 558 PRINTS Cellular retinaldehyde-binding protein signature 395 414 - -
Dere07g1628 558 PRINTS Cellular retinaldehyde-binding protein signature 232 254 - -
Dere07g1628 558 MobiDBLite consensus disorder prediction 1 113 - -
Dere07g1628 558 SMART CRAL_TRIO_N_2 229 254 IPR011074 -
Dere07g1628 558 SUPERFAMILY CRAL/TRIO N-terminal domain 121 269 IPR036273 -
Dere07g1628 558 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 268 437 IPR001251 -
Dere07g1628 558 CDD SEC14 274 438 IPR001251 -
Dere07g1628 558 MobiDBLite consensus disorder prediction 151 166 - -
Dere07g1628 558 PANTHER PATELLIN-1 83 555 IPR044834 GO:0008289
Dere07g1628 558 Coils Coil 123 143 - -
Dere07g1628 558 MobiDBLite consensus disorder prediction 188 209 - -
Dere07g1628 558 Pfam CRAL/TRIO domain 278 437 IPR001251 -
Dere07g1628 558 MobiDBLite consensus disorder prediction 67 113 - -
Dere07g1628 558 Gene3D - 119 470 IPR036865 -
Dere07g1628 558 MobiDBLite consensus disorder prediction 151 209 - -
Dere07g1628 558 FunFam SEC14 cytosolic factor family protein 273 453 - -
Dere07g1628 558 SUPERFAMILY CRAL/TRIO domain 278 447 IPR036865 -
Dere07g1628 558 MobiDBLite consensus disorder prediction 17 51 - -
Dere07g1628 558 ProSiteProfiles GOLD domain profile. 448 553 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1628 Dere-ChrDere07 23697028 23699013 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1628 233 432 Acyl Lipid Metabolism Gene Families AT1G55840 27.014 4.80e-09 56.2