Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1626 ATGGCTGAGGAACCCCAGAAGTTAGTTGAGGAGGTGGTGCCAGTGGCTGAGAAGTCTCTTACTGAAGAGCAGAAAGAGAAAGAGCCCGAGAAGCCCGTCACCGAAGCGGAGCCTGAGAAACTCGTCACTGAGAGTGAAAAGCAACCTGAAGAGAAGCCGGTGGGTCCCACTGAAGAAGTCGTCGAGGAGGAGAAACCCAAGGCCCCGATAGTTGAACCCAAGATTGCCCAATCTGTTTCTTTCAAGGAGGAGAGCAACGTAGTAGGCGAACTCCCTGACGCTCAGAAGAAGGCCCTTGATGAGCTTAAACAGCTTATTCAAGAAGCGCTGAACAAGCACGAGTTCACCGCTCCGCCGCCGCCGCCGCCGCCGCCCGCCAAGGAGGAGGAGAAGAAGAAAGACGTGGCAGAGGAGAAGAAAGAAGAAGAGGTAGCAGAGAAGAAGAAAGAGGAGGAGGTAGCAGAGGAGAAGGAGGAAGAGAAACCTGCTGTAGCTGAAGAGCCTAAGGTTGAAGAAAAAACCGAAGTAGGGGCTCCTAAAGAGGCTGACGTTGTTGAAGAGCCACCCAAAGTTGAAGCTGAAACTGTCACAGAAGAGAAAAAGGAGGAAGAGAAGCCTACACCGGAAGCTGTGGTTGTCACAGAGGAGGTGGAAAAAGTTTCTACCGTGGAACACGACGATTCTAAGACAGTGGAGGCTATCAAAGAGAGCATAGTTTCAGTCTCTGAGGAGGCAGCACCTTCAACCAAGGACGGTGAGGCCGCAGCTCCGGCATCTGATACGGTGGTGCCGGAGGCAAAAGTCGAGGAGGAGGTCCCTGCGCCGCCTCCGCCTCCGCCGGAGGAAGTTTCAATCTGGGGAATTCCCCTGCTTGCGGATGAGAGGAGTGACGTGATACTCCTGAAATTCCTCAGAGCAAGGGACTTCAAGGTGAAGGATGCCTTCACGATGATCAAGAACACTGTGCGTTGGCGAAAGGAATTCGGAATCGACGCACTCGTTGAGGAAGATCTCGGGAACGATTGGGACAAGGTGGTGTTCACTCATGGGTATGACAAAGAAGGGCATCCAGTCTGCTACAACGTGTTTGGTGAGTTCGAGAACAAGGAGTTGTATCAGAACACGTTTTCTGATGAGGAGAAGCGCCAGAAGTTCATCAGATGGAGGATTCAGTTCTTGGAGAAGAGTATTAGGAAATTTGAATACACTCCTACTGGTATTTGTACTATCGTCCAGGTCAATGATCTCAAGAATTCACCAGGACTGGGTAAAAGGGAACTCAGGCAAGCAACCAATCAGGCCCTTCATTTGCTTCAGGATAACTATCCTGAGTTCGTAGCCAAGCAGGTGTTTATCAATGTTCCATGGTGGTACCTCGCCTTTTCAAGGATGATCAGTCCATTCCTGACACAGAGAACCAAAAGCAAATTTGTATTTGCTGGCCCATCCAAATCTGCTGAAGCCCTTTTCAAATATATAGCTCCTGAGCAAGTTCCTATTCAGTACGGTGGATTGAGCAGGGAGGTTGACACTGAATTCACAACCGCTGACGCTGCTACTGAGGTTACAATTAAACCATCAACAAAACACATTGTTGAATTCCCAGCTCCTGAGGATTTGAATCTAGTTTGGGAAGTCAGAGTTGTGGGTTGGGATGTCAACTATGGAGCCGAGTTTGTGCCAAGTGGCGAGGATAAATACACGGTGATAGTACAGAAGAGCAGGAAGATTAGCGTTGCTGATGAAACAGTGATTAGTCACAGCTTTAAAGTTGGAGAACCTGGTAAAGTTGTTCTCACGATTGATAACCAGACATCCAAGAAGAAGAAGCTCCTGTACAGGTCCAAGACCAAACCCATCTCTGAGTGA 1869 0.4933 MAEEPQKLVEEVVPVAEKSLTEEQKEKEPEKPVTEAEPEKLVTESEKQPEEKPVGPTEEVVEEEKPKAPIVEPKIAQSVSFKEESNVVGELPDAQKKALDELKQLIQEALNKHEFTAPPPPPPPPAKEEEKKKDVAEEKKEEEVAEKKKEEEVAEEKEEEKPAVAEEPKVEEKTEVGAPKEADVVEEPPKVEAETVTEEKKEEEKPTPEAVVVTEEVEKVSTVEHDDSKTVEAIKESIVSVSEEAAPSTKDGEAAAPASDTVVPEAKVEEEVPAPPPPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDALVEEDLGNDWDKVVFTHGYDKEGHPVCYNVFGEFENKELYQNTFSDEEKRQKFIRWRIQFLEKSIRKFEYTPTGICTIVQVNDLKNSPGLGKRELRQATNQALHLLQDNYPEFVAKQVFINVPWWYLAFSRMISPFLTQRTKSKFVFAGPSKSAEALFKYIAPEQVPIQYGGLSREVDTEFTTADAATEVTIKPSTKHIVEFPAPEDLNLVWEVRVVGWDVNYGAEFVPSGEDKYTVIVQKSRKISVADETVISHSFKVGEPGKVVLTIDNQTSKKKKLLYRSKTKPISE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1626 622 CDD SEC14 340 505 IPR001251 -
Dere07g1626 622 MobiDBLite consensus disorder prediction 103 224 - -
Dere07g1626 622 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 518 614 IPR036598 -
Dere07g1626 622 Pfam CRAL/TRIO domain 344 504 IPR001251 -
Dere07g1626 622 Gene3D GOLD domain 522 617 - -
Dere07g1626 622 SMART sec14_4 339 507 IPR001251 -
Dere07g1626 622 Gene3D - 344 521 IPR036865 -
Dere07g1626 622 Coils Coil 126 167 - -
Dere07g1626 622 SMART CRAL_TRIO_N_2 296 321 IPR011074 -
Dere07g1626 622 SUPERFAMILY CRAL/TRIO domain 345 507 IPR036865 -
Dere07g1626 622 PRINTS Cellular retinaldehyde-binding protein signature 299 321 - -
Dere07g1626 622 PRINTS Cellular retinaldehyde-binding protein signature 462 481 - -
Dere07g1626 622 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 335 510 IPR001251 -
Dere07g1626 622 MobiDBLite consensus disorder prediction 16 70 - -
Dere07g1626 622 PANTHER PATELLIN-1 144 619 IPR044834 GO:0008289
Dere07g1626 622 MobiDBLite consensus disorder prediction 125 224 - -
Dere07g1626 622 Gene3D - 268 327 - -
Dere07g1626 622 Pfam CRAL/TRIO, N-terminal domain 281 320 IPR011074 -
Dere07g1626 622 SUPERFAMILY CRAL/TRIO N-terminal domain 81 337 IPR036273 -
Dere07g1626 622 ProSiteProfiles GOLD domain profile. 511 617 IPR009038 -
Dere07g1626 622 MobiDBLite consensus disorder prediction 242 280 - -
Dere07g1626 622 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1626 Dere-ChrDere07 23628632 23631509 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1626 300 499 Acyl Lipid Metabolism Gene Families AT1G55840 30.415 9.79e-10 58.5