Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1615 ATGGCTTCTTCTTCTTCTAATGGTGGCGTGCCACCAGGGTTCCGGTTTCATCCGACCGACGAGGAGCTGCTTCATTACTACTTGAAGAAGAAGGTTTTGTATCAGAAGTTTGACATGGAGGTTCTCAGAGAGGTGGACTTGAACAGGGTGGAGCCATGGGAGTTGCAAGAAGATGACCATGATCCTCATGGAAATCAAGATGAAGATAGTTGGGTGGTATGCAAAGTGTTCAAGAAGAAGCATTTATTCAAGATTGGGAATGAAAGTGGCTTGACGAACAACTCCTCAAGCATCAATCAACCAAACTCCATCTTCATGCACAAAGAAAGCCTGTACATACAACAACATGACCAACAAAACCCTAGGAACTCATCTTCAGGAATATTTGACCATGAAAAGCCTGAGCTTGCTCTCCAATTTCTCCACATGCAAAACCCTCAGAACTCATTCATGCAGTCACAGCCTCCTCTTCAGAACCTGAAGTCCATTGTTTATGACTGCTATAATGTACCTTCTGATTCAAATACTGTTATTGCGAAGCAACTGATCTTGACAAACCCTAGAGATTATGAAGTGGAAGGCGGTACAGGAAGAGATCAAGGAATGAATGAGTGGGGTGTGACTGTAAGTGATGGATTTGTCAGCGTCACTTCTCATCTGGGAAATAAGGACTTATCGAAACAGGTTTCACTGAGGGGAGAGATGGACTTTTGGAGCTATGGAAAGCAATGA 732 0.4358 MASSSSNGGVPPGFRFHPTDEELLHYYLKKKVLYQKFDMEVLREVDLNRVEPWELQEDDHDPHGNQDEDSWVVCKVFKKKHLFKIGNESGLTNNSSSINQPNSIFMHKESLYIQQHDQQNPRNSSSGIFDHEKPELALQFLHMQNPQNSFMQSQPPLQNLKSIVYDCYNVPSDSNTVIAKQLILTNPRDYEVEGGTGRDQGMNEWGVTVSDGFVSVTSHLGNKDLSKQVSLRGEMDFWSYGKQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1615 243 Pfam No apical meristem (NAM) protein 11 74 IPR003441 GO:0003677|GO:0006355
Dere07g1615 243 Gene3D NAC domain 19 65 IPR036093 GO:0003677|GO:0006355
Dere07g1615 243 ProSiteProfiles NAC domain profile. 10 158 IPR003441 GO:0003677|GO:0006355
Dere07g1615 243 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 57 - -
Dere07g1615 243 SUPERFAMILY NAC domain 8 78 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1615 Dere-ChrDere07 23318825 23321943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1615 4 71 NAC Transcription Factor Family AT1G33280 69.118 3.43e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g1615 NAM 6e-14 No_clan