Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1609 ATGGATACATCATCTAGTACGTGTGAGATAGTGGAATCAAGAGATGAGGTAATTTCTGAGTTCAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCATAAATCAGGGAAAAAGTATTCTATTGAGGATGATATTGATCGTCTTTTCCAAGCTATTGATTTTAAGAATTCAGTTAGAGGTTCTAGTACACCACGTTCACAAAAGAGTGCTCTTAAAAGGCCGATAAAAGTTAGTTCATCTCAGGCATCAGGAATTGGGATCTCAGAGCCTGTAAGTTTGAAGCAGGCACTTAGAGGACTCTGTATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTAGCAAAGCCATCCAGTTCATCTAGAGTATCTGAGGCTGGAACTATTAAGAAGTTGTATACAGCGGTGGTAGATGAAGGGAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCAGAGATATCTGCACCTTCTGATAAAATGCCCAGGGAAGAGAAATCAAGTTCTAGTGCTGATCATTCTACTCCTTTTGTTGATGCAACAAACCCAAAAGCAACCACATCCAGGCTAGCATCCCGGGATCAAATTGTTCCTCTTCCATCAGAATGTGAAAGTGAAAAGTTAGTCACAGAGGCTGGAAAAACTATACTTGCAAATTCATCCTCAGTTGCTTATGAAAGTGAGGAAGTGCCTGAGGTCAAGATGGTTTCAACTTCCTCAAGCAAAGCGTCCCAAAGTTCTTCAATGCCAGATAAGGGGCAGGAAGCTGAGTTGCATTCTGAAGCTTATCCACCAAGTACTAGCACTACTAGTGGAGTGGACAAATCCACAAGCAGTAGTACATGTTTGGCGAAGCCCATGTTCAGGAACATGAGCTTCCTTAAGAAAAAAGTAAAGCAGGAATTATGTTCTACCTCGAGTAGCTCCACTCAATGTACCAGAAAAGCTGACAATGACTTGGATCCTAGTATGAGTAATTTGAACAAGGAGACTGGTAAATCTAATTTGAAGCAGGAAATGAAAGAAAACGAGAAATTGTCGCCCTGCAGTTCAAATCATAGCGTGGAAGTTAACTCAAATAATGTGGGTATGGATTCAGTCAAACCTGGTTTCAGTATGAACTGTAGTAAGAGAACTAAATTTCTAGTGACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGCAGTACAACCACAAGCATAAGTGAAGAGAGCAATCTAAGTGGCTCTAGTCGCAGCGGCCACCGGCCTCACATGTCAAAACACTTGAGGTGGGAAGCTGTTCGTGCTGTTCAGCAGCAGCATGGTAATTTAAGTTTGAGGCACTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACCGTTTATCTTGCAGAACTGATTGGTACAAGCTGCCTTTTTGCTTTGAAAGTGATGGACAATGAGTTTTTGGCCAGCCGGAAGAAAATGTTCAGGGCTCAAACTGAAAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACACTTTATTCCTATATTACAACAGATAAACTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTGCATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCTGAACAAGCAGCCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCTTGGAGTATTTGCACATGCTAGGAGTTGTATATCGAGATTTGAAGCCAGAAAATATCCTGGTCCGGGAAGATGGCCACATTATGTTGACAGATTTTGACTTGTCACTTAGATGTTCTGTCAATCCAACACTAGTCAAGTCATCTTCGCCGGATGTGGATCCAACAAAGAAGATGTCCAGTCCCTGTGCAGAGGCAAGCTGCATACACCCTTTCTGTCTACAACCTAATTGGCAAGTATCCTGTTTTACTCCTATCCTTTTATCTGCTGGAGCGAAATCTAGAAAGATGAAGTCTGACATAGCTGCTCAGGTTGGTCCATTGCCACAACTTGTAGTAGAGCCAACCAGTGCCCGTTCTAACTCTTTCGTGGGAACCTACGAATACCTTGCTCCAGAGATAATCAAAGGTGAGGGTCATGGGAGTGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTGTATGGGAAGACTCCCTTCAAAGGGACAGGAAATGAGGAGACATTAGCCAATGTTGTGTCACAGAGCCTTAAATTCCCGGATGCTCCTATTGTCAGTTTTCATGCAAGAGATTTGATCCGAGGGTTGTTGATAAAGGACCCTGAAAATCGGTTAGGTTCTGTAAAAGGTGCTGCCGAGATAAAACAGCACCCTTTCTTTGAAGGCCTAAATTGGGCTCTAATAAGATGTGCTGCACCACCTGAGCTCCCCAGGTTTCGTGATTTTGGAAGCTGTTTACCGTCTATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGCGAGGAGTTTGAGCTATTTTAG 2532 0.4289 MDTSSSTCEIVESRDEVISEFRMDEKAESSCAHKSGKKYSIEDDIDRLFQAIDFKNSVRGSSTPRSQKSALKRPIKVSSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLAKPSSSSRVSEAGTIKKLYTAVVDEGKGNLVEISLVPEISAPSDKMPREEKSSSSADHSTPFVDATNPKATTSRLASRDQIVPLPSECESEKLVTEAGKTILANSSSVAYESEEVPEVKMVSTSSSKASQSSSMPDKGQEAELHSEAYPPSTSTTSGVDKSTSSSTCLAKPMFRNMSFLKKKVKQELCSTSSSSTQCTRKADNDLDPSMSNLNKETGKSNLKQEMKENEKLSPCSSNHSVEVNSNNVGMDSVKPGFSMNCSKRTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQQQHGNLSLRHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKMFRAQTEREILQMLDHPFLPTLYSYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVDPTKKMSSPCAEASCIHPFCLQPNWQVSCFTPILLSAGAKSRKMKSDIAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGTGNEETLANVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCLPSMASQKENANDLEDTEDCEEFELF 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1609 843 MobiDBLite consensus disorder prediction 346 366 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 222 279 - -
Dere07g1609 843 Gene3D Phosphorylase Kinase; domain 1 456 537 - -
Dere07g1609 843 Gene3D Transferase(Phosphotransferase) domain 1 686 809 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 391 434 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 155 197 - -
Dere07g1609 843 CDD STKc_phototropin_like 456 815 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 304 332 - -
Dere07g1609 843 SMART serkin_6 458 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1609 843 Pfam Protein kinase domain 689 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1609 843 Pfam Protein kinase domain 459 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1609 843 FunFam serine/threonine-protein kinase D6PK-like 687 810 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 170 193 - -
Dere07g1609 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Dere07g1609 843 MobiDBLite consensus disorder prediction 232 252 - -
Dere07g1609 843 ProSiteProfiles Protein kinase domain profile. 458 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1609 843 PANTHER FLIPPASE KINASE 1-RELATED 255 811 - -
Dere07g1609 843 SUPERFAMILY Protein kinase-like (PK-like) 431 810 IPR011009 -
Dere07g1609 843 MobiDBLite consensus disorder prediction 304 368 - -
Dere07g1609 843 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Dere07g1609 843 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
Dere07g1609 843 Gene3D Transferase(Phosphotransferase) domain 1 538 607 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 260 279 - -
Dere07g1609 843 MobiDBLite consensus disorder prediction 398 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1609 Dere-ChrDere07 23202048 23205195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1609 381 843 AGC Kinase Gene Family AT3G52890 67.300 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere07g1609 Pkinase 1.3e-36 CL0016