Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1593 ATGGCAAAGGCATTCTCGTCTCAATCCCTTCTCTTCTCCGTCCTCTTCATCTCCGCCATAGCTAAATCCACCGTCGCCACTCCCTCCAGCTTCATCAAGTCCTCTTGCAGCACCACGAAGTACCCTTCCGTTTGCGAGGAATCTCTCTCGGTGTACTCCTCCTCGATCCGGCAAGACCCTCAGCAACTGGTCCAAACGGCGCTTTCAGTGAGCCTCAACACCACCCTCTCCACCAAGGCCTTCGTGTCGAAACTCAACAAGTTTAGGGGTCTTAAGGGCCGAGAGAACGAGGCTCTACATGACTGCTTGGAAGTGATGAGCGATGGCGTCGATAGGCTCAGTCGTTCGATCAAGGAGCTCGCGCTGTGCAGAGCCAAGGGTCAGGATTTCGCGTGGCACATAAGCAATGTGGAAACGTGGGTTAGCTCTGCGATCACAGATGAAAACACTTGCACTGATGGGTTCGCCGGAAGGGCTTTGAATGGCAGAATCAAGTCTTCGATTAGAGCCAGAATGGTTCGTGTTGCTCAGGTCACTAGTAATGCCCTTTCACTCATCAACCACTACGCCTCTAATCACTGA 582 0.5275 MAKAFSSQSLLFSVLFISAIAKSTVATPSSFIKSSCSTTKYPSVCEESLSVYSSSIRQDPQQLVQTALSVSLNTTLSTKAFVSKLNKFRGLKGRENEALHDCLEVMSDGVDRLSRSIKELALCRAKGQDFAWHISNVETWVSSAITDENTCTDGFAGRALNGRIKSSIRARMVRVAQVTSNALSLINHYASNH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1593 193 SMART PMEI_2 27 185 IPR006501 GO:0004857
Dere07g1593 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 185 - -
Dere07g1593 193 FunFam Pectin methylesterase inhibitor 1 27 189 - -
Dere07g1593 193 NCBIfam pectinesterase inhibitor domain 7 189 IPR006501 GO:0004857
Dere07g1593 193 CDD PMEI-like_3 34 191 - -
Dere07g1593 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 189 IPR035513 -
Dere07g1593 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 189 IPR035513 -
Dere07g1593 193 Pfam Plant invertase/pectin methylesterase inhibitor 30 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1593 Dere-ChrDere07 22938380 22938961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1593 27 186 Carbohydrate Esterase AT3G14310 30.675 1.40e-20 86.7