Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1592 ATGGAGGCCTTTTCTTCTTCCAAACATCTCTTTATCTCTTTTCTCATAATTCTTCCCTCAATCTTCTTCATCACTACATCTGCAGAAAAACCATACCAAGAAGCCAGCACAAAGTTCATCAGAACATCATGCAGTTCCACAACCTACCCAGGCCTCTGCTTCGCCTCCTTGTCGAAGCACGCAAGCGTCATCCAAACAAGCCCTGTGCTTCTCACAGGCACAGCCCTGAACGTGACTCTTGCGTCGGCGAAATCGACGTCGACAATGATGTCGGCGCTGAAGAAGAGCCGCGGGCTGAGGCCGAAGGAGGCGGCGGCCATGAGGGACTGCGTGGAGGAGCTGAGTGACTCGGTGGACGAACTCAGAAAGTCCATCGGAGAGATGGGTCAGCTCGGAGGGTCCAACTTCGAGCTCACCATGAACGACGTGCAGACTTGGGTTAGTGCTGCTTTGACGGACGAGAACACGTGCACCGATGGGTCGCTCAGCTTACTAGCAATGCCTTGGCTTTGA 513 0.5341 MEAFSSSKHLFISFLIILPSIFFITTSAEKPYQEASTKFIRTSCSSTTYPGLCFASLSKHASVIQTSPVLLTGTALNVTLASAKSTSTMMSALKKSRGLRPKEAAAMRDCVEELSDSVDELRKSIGEMGQLGGSNFELTMNDVQTWVSAALTDENTCTDGSLSLLAMPWL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1592 170 NCBIfam pectinesterase inhibitor domain 12 160 IPR006501 GO:0004857
Dere07g1592 170 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 164 IPR035513 -
Dere07g1592 170 SMART PMEI_2 35 167 IPR006501 GO:0004857
Dere07g1592 170 Pfam Plant invertase/pectin methylesterase inhibitor 38 160 IPR006501 GO:0004857
Dere07g1592 170 CDD PMEI-like_3 42 160 - -
Dere07g1592 170 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 160 - -
Dere07g1592 170 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 162 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1592 Dere-ChrDere07 22904469 22905042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1592 36 160 Carbohydrate Esterase AT1G53830 30.709 9.68e-16 72.0