Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1586 ATGCTGGTTCAATTAGCGATGGACCAAGCCCAAGCCATGCATAAGGAAGCTCATGAGTATGCCCCAAAATGTGTGACCCAGAAGCAGAAATGCGTATTCACGGATTGTTTAAAGCTCTACGACCACACCATCTTCCATCTGAACCGAACCCTTCGTGGCCTTCACACCACTTCTTGCTCACTTTCAGACGCACAAACATGGCTCAGCACCGCCCTCACAAACATCGAAACCTGCCGGAGCGGCGCGTTGGAGCAAAGTGTTGGAGATTTCTTGAATAACGAGAGCGAGAAAGTTATAAAGATGATCAGCAATGTGTTAGCTCTGAATGGGGAGTTTTTAAAGGCAGAGAATTACACACAAGAAGATGGGTTTCCGAGTTGGTTTTCTGGGCATGAGAGGAGGTTGTTGAGGTCGGCTTCTGTGAAGGCGAATCTTGTGGTGGCTCTGGATGGTACAGGGCATTTTAAGACAGTGCAGGCTGCGATTGACGCAGCATCACGGAGAAGAGTCAAGACGAGGTTCGTGATACGTGTGAAGAAAGGGATTTATAATGAGAATATTGAGGTTGATAAAAATAATGACAATCTCATGATTGTTGGTGATGGGATGAGAGTTACCATAATCACTAGTAGTAGAAGCGTTCAAGACGGATTTACCACCTTTGGCACTGCTACTGCAGGTCTGTTATCTATTTGTGTCATCTTTTTGCTTCCCGTCCATTTATATAATTGA 732 0.4536 MLVQLAMDQAQAMHKEAHEYAPKCVTQKQKCVFTDCLKLYDHTIFHLNRTLRGLHTTSCSLSDAQTWLSTALTNIETCRSGALEQSVGDFLNNESEKVIKMISNVLALNGEFLKAENYTQEDGFPSWFSGHERRLLRSASVKANLVVALDGTGHFKTVQAAIDAASRRRVKTRFVIRVKKGIYNENIEVDKNNDNLMIVGDGMRVTIITSSRSVQDGFTTFGTATAGLLSICVIFLLPVHLYN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1586 243 CDD PMEI-like_3 1 114 - -
Dere07g1586 243 Pfam Pectinesterase 144 227 IPR000070 GO:0030599|GO:0042545
Dere07g1586 243 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 112 IPR035513 -
Dere07g1586 243 NCBIfam pectinesterase inhibitor domain 3 109 IPR006501 GO:0004857
Dere07g1586 243 Pfam Plant invertase/pectin methylesterase inhibitor 2 108 IPR006501 GO:0004857
Dere07g1586 243 SUPERFAMILY Pectin lyase-like 140 226 IPR011050 -
Dere07g1586 243 PANTHER PECTINESTERASE 6 226 - -
Dere07g1586 243 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 112 IPR035513 -
Dere07g1586 243 SMART PMEI_2 1 108 IPR006501 GO:0004857
Dere07g1586 243 Gene3D - 138 231 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1586 Dere-ChrDere07 22798126 22798857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1586 1 228 Carbohydrate Esterase AT5G51490 52.500 1.83e-74 233