Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1585 ATGGCCAAAACCCTTGGTCTGATCATATTCCTCCTTTCTATATTTTCTCTTGCCTCACCATCCCTTTCAAGCAATCTCTCTAACGCCATTCTAAGCTACTGGTGCAAGAAAACCCCACATCCTTCGACCTGCTTGCACTACGCAAGAAGCCATGACTTCCGAAACGGTGTCGTTCCACGAACTACCTCCCAGTTCAAGAAGCTCGCCCTCAAGATCGCCATGGACCAATCTCTCAAGGCAGAAAGCCGCAACAAGTGGCTCGGCTCAAAGTGCCGAAACAGGCTCGAAAAGGCGGCGTGGAGCGACTGCTTGAAGCTCTATCAAGACAACATCGACCTTCTCAACCAAACCCTAGACTCAATCTCACAGAGCACGGCTTACGACGTGCAGACCTGGCTCAGCTCGGCTCTGACCAACATGGACACGTGTCGAACCGGGTTCGTCGAGCTTGGGGTTAGGGACAATGTTCTACCCCAGGTTGATAACAAGAACATTTCAGAGATGATAAGCAACACGTTGGCTCTGAACAAGGGTGCATCAGCCAAGGCAGAGACAAACGCTTACAAGGATGGTTTTCCGGCGTGGGTTTCGCCGGCAGACCGGAAGCTGTTGCAAGCGTCGACGGCGCCGGTGCCGGATGTCGTGGTGGCGAAGGACGGGTCCGGGAAGTATAAGACCATTAAGGAAGCTTTGGATGAAGCTTCAAAGAGGAGTAGTGTGAGTAAGAGGTTTGTGATATATGTTAAGCCAGGGGTTTACAATGAGAACCTTGAGATTGGGAAGAGTTTAAAGAGTATAATGTTGTATAGTGACAGTATGAGACTCACTGTCATCACGGGAAGCAAGAGTGTTGGAGGAGGTTCTACCACTTTCAATTCTGCTACTGTTGCGGTAACTGGAGAAGGATTCATTGCTCGTGGCATAACATTCCGCAACACTGCCGGTCCACAGAACCACCAAGCGGTGGCACTTCGCTCCGGCGCCGATCTCTCCGTCTTCTATCGCTGCGGCTTCGAAGGCTACCAAGACACTCTCTACGTTGGGGAGAACTGTTGGTTATGA 1062 0.5104 MAKTLGLIIFLLSIFSLASPSLSSNLSNAILSYWCKKTPHPSTCLHYARSHDFRNGVVPRTTSQFKKLALKIAMDQSLKAESRNKWLGSKCRNRLEKAAWSDCLKLYQDNIDLLNQTLDSISQSTAYDVQTWLSSALTNMDTCRTGFVELGVRDNVLPQVDNKNISEMISNTLALNKGASAKAETNAYKDGFPAWVSPADRKLLQASTAPVPDVVVAKDGSGKYKTIKEALDEASKRSSVSKRFVIYVKPGVYNENLEIGKSLKSIMLYSDSMRLTVITGSKSVGGGSTTFNSATVAVTGEGFIARGITFRNTAGPQNHQAVALRSGADLSVFYRCGFEGYQDTLYVGENCWL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1585 353 NCBIfam pectinesterase inhibitor domain 1 178 IPR006501 GO:0004857
Dere07g1585 353 CDD PMEI-like_3 34 181 - -
Dere07g1585 353 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 178 IPR035513 -
Dere07g1585 353 Gene3D - 208 353 IPR012334 -
Dere07g1585 353 Coils Coil 104 124 - -
Dere07g1585 353 SMART PMEI_2 25 175 IPR006501 GO:0004857
Dere07g1585 353 SUPERFAMILY Pectin lyase-like 208 348 IPR011050 -
Dere07g1585 353 Pfam Pectinesterase 213 347 IPR000070 GO:0030599|GO:0042545
Dere07g1585 353 Pfam Plant invertase/pectin methylesterase inhibitor 32 175 IPR006501 GO:0004857
Dere07g1585 353 PANTHER PECTINESTERASE 15 347 - -
Dere07g1585 353 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1585 Dere-ChrDere07 22766939 22769718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1585 34 350 Carbohydrate Esterase AT2G45220 57.729 8.39e-119 351