Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1571 ATGAAACCTCCTTTTCTTTTCCTTCTCACATTCTTCCTCTTTTCCCAGACATACCCTCTACTAGTTTTCTCTGCTTCAACAACTCTCATCTCTTTGCTTTCACTAAAATCTTCCCTCATAGACCCTCACAACACCCTCCATGACTGGCAGGACTCCTCTAACAATTCCCAATACCCTGTTTGGTGTTCATGGTCTGGCATCACGTGCCACCCACGCACATCCAGAATCACCATTCTTGACCTCTCTCAACGCAATCTCTCTGGCTCAATTTCCCCCCAAATCAGATACTTAACCTCCCTAAACCACTTGAATCTCAGCGGAAATGAGTTCACTGGAATCTTCCCACCTGCAATTTTTGAACTCACTGAACTCAGGACTCTGGATATCAACCACAACTACTTCAATTCAACTTTCCCACCTGGCGTTTCTAAGCTCAAGTTCTTAAGGGTCTTCAATGCTTACAGCAACAACTTCGTTGGTCCTCTGCCTCAGGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTAAACCTTGGTGGGAGCTACTTCAACGATAGGATTCCTTCTGGTTATGGAAATTTACCAAGATTGAAGTTCCTTTATCTGGCTGGGAATCTCTTGGAAGGTCCAATACCATCTCAATTAGGCTTCTTGTCACAATTGGAACGTCTGGAAATTGGGTATAACCAGTTTTCTGGAGGATTACCAGTGGAATTGGGATTGTTATCTAGTCTAAGATACTTGGATATTTCCTCTGCTAACATTTCTGACTCTGTGATGCCTCAACTCGGAAACTTGACTATGCTGGAGACATTGTTGCTGTACAAGAATCGGTTAGTGGGTGAAATTCCGACAAGCTTGGGGAATTTGAAGGGTCTCAAAGCTCTTGATTTGTCAGATAACCAACTCACTGGCTCTGTTCCTGCGGAGATTTCAATTTTGAAGGAACTGAACATTTTGAGCTTGATGGACAACCAGCTAACGGGAGAGATACCACAAGGGATTGGAGACCTTCCAAAGCTCGAAACTCTTCTTCTATGGAACAATTCGCTCACTGGGATTCTCCCAGAGACTCTAGGTTCCAATGGGTTACTTCTGAGACTAGATGTGTCCACGAATTCACTCACAGGTCCAATCCCGCCAAGGGTTTGCAATGGAAACAAGCTTATCAAGCTCATTCTCTTTCACAACAAATTTGATGGTGCTATTCCAGAATCACTAGCAAGTTGCACTTCATTAGCAAGGCTTCGAATCCAAAATAACCGTCTTAGCGGCTCCATTCCGTATGGTTTTGGACTTCTTCCCAACCTCACCTTCGTCGACATGAGCAACAACAGCTTTACGGGTCAAATTCCTGAAGATTTCGGGAATGCTATGACATTGCAGTACTTGAATATCTCAGGAAATTCCTTCGAAAACCCATTGCCAAGTAATATTTGGAATGCTACCAATTTACAGATTTTCTCAGCGAGTTCATCGAAAATCATTGGTCAGATTCCAGATTTCATAGGGTGCAAGAACATTTACAGAATCGAATTACAGGGAAATTTCATCAATGGAAGCATCCCTTGGGACATTGGGCACTGCGAAAGACTTGTTGTATTGAATCTGAGTCGCAATTCGCTCTCGGGTATCATACCCTGGGAAATCTCCGTTTTACCCTCCATTACCGACGTTGACCTATCGCATAATTCTCTCTCCGGTACCATACCCTCCAATTTCAACAATTGCACCACGCTCGAGAACTTCAATGTCTCCTTCAATTCCCTCACTGGACCCATCCCTTCGTCCGGTTCCATCTTCCCAAACCTCAACCCCTCCTCCTTCTCCGGCAACGACGGCCTTTGCGGCGGCATTCTGGCAAAGCCGTGCTCCCCGGACACCCTGGCCGCCGCCGACGCCGAAAACAACGCGGCGGAGCAGCACCGCCCAAAGAGAACCGCCGGCGCAGTCGTGTGGATCGTCGCAGCAGCGATGGCAATCGGACTCTTCGCGCTCGTCGCCGGGACCCGATGCCTCCGGGCCAATCAAAGCCGTCCATTCAGCAACGAGCGCGAGATCGGACCATGGAAATTAACCGCGTTTCAACGGTTGAATTTTACAGCGGAGGATGTAATCGAGTGCTTGACGGTGTCGAACAAGATCATAGGGATGGGGTCCACGGGGACGGTGTTCAAAGTGGAGATGCCAGGTGGCGAGATCGTAGCCGTTAAAAAACTATGGGGCAAGCAGAAAGAGAACAGCATCATCCGACGTCGGAGAGGTGTTCTGGCTGAGGTGGACGTGTTAGGGAACGTGAGGCATAGGAACATAGTGAGACTGTTAGGGTGTTGCAGCAACAGGGAGTGTACGATGCTGCTGTACGAGTACATGCCCAATGGGAATTTAGAAGATCTATTACACGGGAAAAACAAAGGGGAAAATGTGTCAGGTGATTGGTTGACAAGGTATAAAATAGCATTGGGTGTGGCTCAAGGGATATGCTATCTGCACCATGACTGTGACCCAGTGATCGTGCACCGCGATCTTAAGCCTAGTAATATATTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTTGGAGTGGCCAAGTTGATTCAGAGTGATGAGTCCATGTCTGTTATTGCTGGATCATATGGCTACATTGCACCTGAATATGCATATACCTTACAAGTTGATGAGAAGAGTGATATCTACAGCTATGGAGTAGTGCTAATGGAGATCTTAACCGGAAAACGATCCGTTGATGCAGTGTTTGGCGATGGAAACAGCATTGTGGATTGGGTTAAGTCTAAGATCAAGACCAAAGATGGCATTAATAACATATTAGATAAGAATGCAGGGTCTGAGTGTGTTTCGGTAAGGGACGAGATGATACAAATGCTTAGGATTGCTATGCTTTGCACTAGCAAAAATCCTGCAGATCGACCTTCCATGAGAGATGTTGTGTTGATGCTTCAAGAGGCCAAGCCAAAGAGAAAATTGTTCGGTAACGTGATAGGACAATGTGGTGATAACAATGTTCGTGGTGGTGGCGACGATATTATTTCGCCGCAAAAGGCTAAAGTGGAAATCTAA 3078 0.4626 MKPPFLFLLTFFLFSQTYPLLVFSASTTLISLLSLKSSLIDPHNTLHDWQDSSNNSQYPVWCSWSGITCHPRTSRITILDLSQRNLSGSISPQIRYLTSLNHLNLSGNEFTGIFPPAIFELTELRTLDINHNYFNSTFPPGVSKLKFLRVFNAYSNNFVGPLPQEFMRLRFLEKLNLGGSYFNDRIPSGYGNLPRLKFLYLAGNLLEGPIPSQLGFLSQLERLEIGYNQFSGGLPVELGLLSSLRYLDISSANISDSVMPQLGNLTMLETLLLYKNRLVGEIPTSLGNLKGLKALDLSDNQLTGSVPAEISILKELNILSLMDNQLTGEIPQGIGDLPKLETLLLWNNSLTGILPETLGSNGLLLRLDVSTNSLTGPIPPRVCNGNKLIKLILFHNKFDGAIPESLASCTSLARLRIQNNRLSGSIPYGFGLLPNLTFVDMSNNSFTGQIPEDFGNAMTLQYLNISGNSFENPLPSNIWNATNLQIFSASSSKIIGQIPDFIGCKNIYRIELQGNFINGSIPWDIGHCERLVVLNLSRNSLSGIIPWEISVLPSITDVDLSHNSLSGTIPSNFNNCTTLENFNVSFNSLTGPIPSSGSIFPNLNPSSFSGNDGLCGGILAKPCSPDTLAAADAENNAAEQHRPKRTAGAVVWIVAAAMAIGLFALVAGTRCLRANQSRPFSNEREIGPWKLTAFQRLNFTAEDVIECLTVSNKIIGMGSTGTVFKVEMPGGEIVAVKKLWGKQKENSIIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLEDLLHGKNKGENVSGDWLTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILTGKRSVDAVFGDGNSIVDWVKSKIKTKDGINNILDKNAGSECVSVRDEMIQMLRIAMLCTSKNPADRPSMRDVVLMLQEAKPKRKLFGNVIGQCGDNNVRGGGDDIISPQKAKVEI 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1571 1025 SUPERFAMILY L domain-like 58 376 - -
Dere07g1571 1025 SMART serkin_6 709 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1571 1025 ProSiteProfiles Protein kinase domain profile. 709 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1571 1025 Pfam Leucine Rich Repeat 531 552 IPR001611 GO:0005515
Dere07g1571 1025 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 677 789 - -
Dere07g1571 1025 Gene3D Ribonuclease Inhibitor 283 382 IPR032675 -
Dere07g1571 1025 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Dere07g1571 1025 FunFam leucine-rich repeat receptor-like protein kinase TDR 790 997 - -
Dere07g1571 1025 SMART LRR_typ_2 433 456 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 241 265 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 289 313 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 121 145 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 552 575 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 97 116 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 193 217 IPR003591 -
Dere07g1571 1025 SMART LRR_typ_2 337 360 IPR003591 -
Dere07g1571 1025 Gene3D Transferase(Phosphotransferase) domain 1 790 999 - -
Dere07g1571 1025 SUPERFAMILY RNI-like 276 612 - -
Dere07g1571 1025 Gene3D Phosphorylase Kinase; domain 1 686 789 - -
Dere07g1571 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Dere07g1571 1025 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 211 306 - -
Dere07g1571 1025 Pfam Leucine rich repeat 268 326 IPR001611 GO:0005515
Dere07g1571 1025 Pfam Leucine rich repeat 75 133 IPR001611 GO:0005515
Dere07g1571 1025 SUPERFAMILY Protein kinase-like (PK-like) 712 986 IPR011009 -
Dere07g1571 1025 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Dere07g1571 1025 FunFam Leucine-rich repeat receptor-like protein kinase TDR 310 625 - -
Dere07g1571 1025 FunFam Leucine-rich repeat receptor-like protein kinase 26 188 - -
Dere07g1571 1025 Gene3D Ribonuclease Inhibitor 186 282 IPR032675 -
Dere07g1571 1025 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Dere07g1571 1025 Gene3D Ribonuclease Inhibitor 504 625 IPR032675 -
Dere07g1571 1025 Pfam Protein kinase domain 712 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1571 1025 PRINTS Leucine-rich repeat signature 552 565 - -
Dere07g1571 1025 PRINTS Leucine-rich repeat signature 292 305 - -
Dere07g1571 1025 Gene3D Ribonuclease Inhibitor 383 503 IPR032675 -
Dere07g1571 1025 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 195 988 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1571 Dere-ChrDere07 22488928 22493156 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1571 1 1001 Receptor kinase-like Gene Family AT1G08590 44.043 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere07g1571 Pkinase 2.2e-47 CL0016