Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1565 ATGTCGTTTCCAGTGGAGAACCAGAACCCTAGCCCTACTCCACCATTGAAGAAGAGACCATCTAGCTGGTCCAACGTCTGGCTCAAGAACACCAAACCTCTCAAGCATATGGTTGTGGCCATGCAAGTCCAGTCCCTTTCTCCGCATGACGACCCCAAATCGAAAACCCTAATCTCCAATATCTTCCCAATTGACTTAACCCTTCTATTATCTGACGAGCTTCTCCTCAACATCCTGGCCAGGCTCCCCGATTCGCAGAGGAATTCCAATTCTATTGTCTGCAAGCGGTGGTTGAATCTCCAGGGGCGGCTTGTGCGGAACCTCAAAGTGCTGGACTGGGACTTCGTCTTATCTGGTAGATTGATTCATAGATTCCCCAATCTAAACCATGTAGATTTGGTTTCTGGGTCTCTGATTTCGCCCCGAAATTCGGGTATCTTTCTGAGCCACCGACTTGTTTCGATGCATATTGATTCTGGATTTTACCCCAATTGGTGCCTTGGGGAGGAAAAGAATCTTCTTCCTGTTGATGTAATTGATAGTGGGCTGAAAGCCCTTGCTAGTGGGTGTCCCAATTTGCGCAAATTACAGGTTATTGGTGCTAGTGAAGTGGGTTTATTGAGTGTGTCTGGGGAGTGTTCTACGCTGCAAGAATTGGAATTGCAAAAATGCAATGACAATGTGCTGCGCGGGATTGCAGCGTGTGAGAATCTGCAGATCTTGAAATTGGTTGGAAATGTTGGTGGGTTCTACAGCTCGGTGGTCTCTGATATAGGATTGACAATTTTAGCTCAAGGTTGTAAGAGATTGGTCAAGCTTGAGCTCAGTGGATGTGAAGGAAGCTTTGATGGAATCAAAGCAATTGGCAAGTGCTGTCAAATGCTGGAGGAATTGACTTTTTCCGATCATAGAATGGATGATGGGTGGTTGGCTGCAGTAGCTTTTTGTGAGAATTTGAAGACTTTGAGGTTCCAATCGTGTAGATGGATCGATCCAAATCCAGGACCAGAGGAGCATTTGGGCTCGTGTCAGGCACTTGAACGTTTGCATTTGCAGAAATGCCAGTTACGGGACAAAAATAGCATAGCAGCTATATTTCCCGTATGCAGGGCCGCGAGGGAGATTATTATCCAGGACTGCTGGGGATTGGATGATAATATGTTCAGTTTTGCAAGTATCTGCAGGCGGGTAAAGCTTTTAAGCTTAGAAGGATGTTCATTGCTAACAACAGAAGGTTTAGAGTCTGTAATTCAATCCTGGAAGGATCTTCAGAGCCTTAGAGTAGTTTCCTGCAAGAATATAAAGGATAGTGAAATCTCACCTTCATTGGCAACCTTGTTCACAACTCTCAAAGAATTAAGATGGAGTCCAGATACCAAGTCTCTTCTTCCATCAAGCATTGTCGGAATAAGCATGGGGAAGAGAGGAGGTAAATTTTTCAAGAGAACGTGA 1452 0.4504 MSFPVENQNPSPTPPLKKRPSSWSNVWLKNTKPLKHMVVAMQVQSLSPHDDPKSKTLISNIFPIDLTLLLSDELLLNILARLPDSQRNSNSIVCKRWLNLQGRLVRNLKVLDWDFVLSGRLIHRFPNLNHVDLVSGSLISPRNSGIFLSHRLVSMHIDSGFYPNWCLGEEKNLLPVDVIDSGLKALASGCPNLRKLQVIGASEVGLLSVSGECSTLQELELQKCNDNVLRGIAACENLQILKLVGNVGGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMDDGWLAAVAFCENLKTLRFQSCRWIDPNPGPEEHLGSCQALERLHLQKCQLRDKNSIAAIFPVCRAAREIIIQDCWGLDDNMFSFASICRRVKLLSLEGCSLLTTEGLESVIQSWKDLQSLRVVSCKNIKDSEISPSLATLFTTLKELRWSPDTKSLLPSSIVGISMGKRGGKFFKRT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1565 483 FunFam F-box protein At5g51380 63 331 - -
Dere07g1565 483 Gene3D Ribonuclease Inhibitor 205 456 IPR032675 -
Dere07g1565 483 FunFam F-box protein 332 466 - -
Dere07g1565 483 SUPERFAMILY F-box domain 60 101 IPR036047 GO:0005515
Dere07g1565 483 Gene3D - 66 103 - -
Dere07g1565 483 PANTHER UNCHARACTERIZED 69 439 - -
Dere07g1565 483 Pfam F-box domain 69 100 IPR001810 GO:0005515
Dere07g1565 483 SUPERFAMILY RNI-like 228 455 - -
Dere07g1565 483 SMART LRR_CC_2 267 291 IPR006553 -
Dere07g1565 483 SMART LRR_CC_2 343 368 IPR006553 -
Dere07g1565 483 SMART LRR_CC_2 235 266 IPR006553 -
Dere07g1565 483 SMART LRR_CC_2 190 215 IPR006553 -
Dere07g1565 483 SMART LRR_CC_2 394 419 IPR006553 -
Dere07g1565 483 MobiDBLite consensus disorder prediction 1 23 - -
Dere07g1565 483 SUPERFAMILY RNI-like 106 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1565 Dere-ChrDere07 22408200 22410448 Dispersed/Wgd