Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1551 ATGGCCCAGCATAAAATTTCTGTATTCCTTGCAATTTCAGCAACTTGCTTGGCTTTGTGGGCGTTATGCCTTGGCATTTCAGGACTTACAGAAACTGAAGCTCTGCTGAACTGGAAACAAAGTCTCCCAAACCAACCAATTTTGGATTCATGGGTCTCTCCTCCACCACACTCCAATTCTAATAGTGCAGCTCAAACCCCATGTTCATGGCGTGGAATCACATGTGATTCTTCAGGAAGTGTGGTTGAACTGGACTTGAAACGCACTGGTCTACAAGGTACCCTTCAAAACTTGAACTTCTCAGCATTTCCAAATCTGCTTCTTCTTAATCTCAAATTTAACGAACTCAGTGGCCCCATACCAGAAAGCATTGGGGTGCTTTCAAAACTCCAGTTCCTTGACCTTAATCACAATCATCTCAATGGTACTATACCTTTGTCTCTTGCTAATCTCACTCAACTTTACAAGCTTGATCTTTCTCAAAATGATCTAACAGGAATACTAGACCCTCGTCTATTTCCTAATGGCACTGATCGTTCCAAAATTGGCATGATTGGGATCCAAAATCTCGTCTTACAAGACACCCTCCTTAGTGGTAGAAATCCAAATGAAATTGGGAACCTAAGAAATTTAACTATTCTAGCTTTAGATGGGAATAGCTTCTATGGGCCCATTCCACCATCTCTAGCCAACTGTACACAGTTAAATGTTATCTCAATGACTGAAAACCATCTCTCTGGCATAATTCCCCCTAGTATTGGTAGATTGACCAATCTCATTGATATTCGACTTCGCAACAACAATTTACATGGCCATGTGCCACAAGAGTTTGGAAATCTTTCATCTTTAACTGTACTGCATCTTGCTGAGAACAACTTCACTGGTCAATTACCACCGCATGTGGGCAAAGGTGGTAAGCTTGTCAATTTCACCGCAAGCCACAATAGTTTCACTGGTCCAATCCCAGTAAGCCTAAGAAATTGCTCATCTTTATTCAAAGTTCAACTTGAACACAACCAACTGAGAGGTTATGCAGACCGAGATTTTGGAGTTTATCCTAATCTTACTTACCTTGACATAAGCTACAATAGAGTTCAAGGTAAGCTCTCTGCAAATTGGGGTGCCTGCAAAAGCTTGCAACTTCTTAAAGTGGCTGGAAATTTGATACGCGGCACTATTCCTGTCCCTGACCAAATTAGAAATCTTGCTGCCCTACAATATTTTTTGGACTTGAGTTACAATTCACTCTCTGGAGAAATTCCTGGTGATCTTGATAAGCTCGCAAATTTGGAAAGCTTAAATATGTCTCACAATAATCTGTCAGGCTCTATCCCTAATTCGCTTGAGCCTACACATGAAAGCAACAAGAAAAAAGTTGTAATAGTTATTGTCACTTGTGTGGGAGCTGCACTGTTTATCTCAATACTGTTGATTGGGATTTTTGTTATTCGCCATGAGAGAAACTCAAGAGTTTCAAAAGACAAATCTACAGCGATGATCCAAAATCCATTTTCAGTATGGCACTTCAATGGTAGAGTTGTATACGAAGACATAACTGAAGCAACTAAAAACTTTGATGACATGTATTCTATTGGGAAGGGAGCTTTTGGAACAGTTTATAAAGTGGTAATGCCAGGAGGTGACATTTTTGCTGTAAAAAAGTTAAGATATGAAGCAGAAGATTTAGATCTTGAGAGTTTAAAAGCCTTTAAGAGTGAGATTGAAGCATTGACAGAAACACGCCATCGAAACATTGTGAAGTTGTATGGATTTTGCTCCCAAGGGTTGCACACATTTTTAATTTATGAGTATGTGGAAAGAGGGACTTTAGCTGATATGCTTAAAAGCGACGAAGAAGCATTAGAGTTAGATTGGCCCATGAGGGTTGAGATCGTCAAAGGTGTAGCTCAAGCATTATCATACATGCATCATGATTGTAATCCACCAATAATTCACAGAGACATATCAAGCAACAATATATTATTGTCAGCAAATCTTGTAGCCCATGTCTCTGACTTTGGCACAGCAAGGTTCCTGAAGCCTGATTCATCAATTTGGACAATTGCCGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACTCAATGGCAGTGTCTGAGAAATGTGACGTGTTTAGCTTTGGAGTTTTAGCTCGAGGTTCTTATGGGAAAGCATCCAGGTGA 2184 0.402 MAQHKISVFLAISATCLALWALCLGISGLTETEALLNWKQSLPNQPILDSWVSPPPHSNSNSAAQTPCSWRGITCDSSGSVVELDLKRTGLQGTLQNLNFSAFPNLLLLNLKFNELSGPIPESIGVLSKLQFLDLNHNHLNGTIPLSLANLTQLYKLDLSQNDLTGILDPRLFPNGTDRSKIGMIGIQNLVLQDTLLSGRNPNEIGNLRNLTILALDGNSFYGPIPPSLANCTQLNVISMTENHLSGIIPPSIGRLTNLIDIRLRNNNLHGHVPQEFGNLSSLTVLHLAENNFTGQLPPHVGKGGKLVNFTASHNSFTGPIPVSLRNCSSLFKVQLEHNQLRGYADRDFGVYPNLTYLDISYNRVQGKLSANWGACKSLQLLKVAGNLIRGTIPVPDQIRNLAALQYFLDLSYNSLSGEIPGDLDKLANLESLNMSHNNLSGSIPNSLEPTHESNKKKVVIVIVTCVGAALFISILLIGIFVIRHERNSRVSKDKSTAMIQNPFSVWHFNGRVVYEDITEATKNFDDMYSIGKGAFGTVYKVVMPGGDIFAVKKLRYEAEDLDLESLKAFKSEIEALTETRHRNIVKLYGFCSQGLHTFLIYEYVERGTLADMLKSDEEALELDWPMRVEIVKGVAQALSYMHHDCNPPIIHRDISSNNILLSANLVAHVSDFGTARFLKPDSSIWTIAGTYGYAAPELAYSMAVSEKCDVFSFGVLARGSYGKASR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1551 727 FunFam Nuclear pore complex protein NUP107 29 178 - -
Dere07g1551 727 Pfam Protein kinase domain 528 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1551 727 Gene3D Transferase(Phosphotransferase) domain 1 605 719 - -
Dere07g1551 727 SUPERFAMILY Protein kinase-like (PK-like) 505 717 IPR011009 -
Dere07g1551 727 Gene3D Phosphorylase Kinase; domain 1 484 604 - -
Dere07g1551 727 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Dere07g1551 727 ProSitePatterns Tyrosine protein kinases specific active-site signature. 650 662 IPR008266 GO:0004672|GO:0006468
Dere07g1551 727 ProSiteProfiles Protein kinase domain profile. 525 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1551 727 Gene3D Ribonuclease Inhibitor 175 458 IPR032675 -
Dere07g1551 727 FunFam Leucine-rich repeat receptor protein kinase MSP1 486 604 - -
Dere07g1551 727 Pfam Leucine Rich Repeat 429 449 IPR001611 GO:0005515
Dere07g1551 727 SMART LRR_typ_2 280 304 IPR003591 -
Dere07g1551 727 SMART LRR_typ_2 256 279 IPR003591 -
Dere07g1551 727 SMART LRR_typ_2 208 232 IPR003591 -
Dere07g1551 727 SMART LRR_typ_2 427 450 IPR003591 -
Dere07g1551 727 SMART LRR_typ_2 151 175 IPR003591 -
Dere07g1551 727 SMART LRR_typ_2 127 150 IPR003591 -
Dere07g1551 727 ProSiteProfiles Leucine-rich repeat profile. 429 451 IPR001611 GO:0005515
Dere07g1551 727 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Dere07g1551 727 PRINTS Leucine-rich repeat signature 427 440 - -
Dere07g1551 727 PRINTS Leucine-rich repeat signature 154 167 - -
Dere07g1551 727 PANTHER UNNAMED PRODUCT 105 717 - -
Dere07g1551 727 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 249 456 - -
Dere07g1551 727 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Dere07g1551 727 SUPERFAMILY L domain-like 64 450 - -
Dere07g1551 727 Pfam Leucine rich repeat 234 293 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1551 Dere-ChrDere07 21319845 21322636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1551 83 697 Receptor kinase-like Gene Family AT4G08850 35.754 2.05e-124 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere07g1551 Pkinase 1.4e-41 CL0016