Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1540 ATGGAGACCCATTTGGGATTAGTTGCAGGCTCTCATAACAGCAACGAGTTAATCATCATCAACCAAGATGGCAATTTCTCTAGATCAGAAGTGCATGAGCTATGTGGGCAAGTGTGTCAGATATGTGGGGATGAGATAGAGGTGAATGCAGATGGGGAGGTGTTTGTGGCTTGCAATGAGTGTGCCTTTCCTGTTTGAAGTGCTAGAGTTGAGGGAGATGAGGAGGAGGATGACATTGATGACTTGGAGAATGAATTCGATTTCGATGGAGGAAGAAAGCAGGTTGATGATGATGACATACCAGAAAAGCATCATGCTGTAGTCCCCTCACCCATGGGCAATCAGGTAATTGCACTGCAAATGCAAGCTAGACCTATGGATCCTTCCAAGGACTTGGCTGCTTATGGCTATGGAAGTGTTGCATGGAAGGAGAGAATGGACATGTGGAAGCAAAGGCAAGACAAACTTTGTAAAATGAGAGAAGAAAATAGCAAGGAAGAGTATCATGACAATTTTGCAGATGACACAGAATTTCCATTAATGGACGAGGCAAGACAACCATTGTCAAGAAAGATGGCTATTCCATCCAGCCAAATCAACCCTTACCGTATAATGATAATAATCCGACTTGTGATTCTTGGCTTCTTCTTCCATTATCGTCTTACCCACCCAACACACAATGCCTTTGGTCTCTGGCTTGTTGCTGTGATATGTGAGCTCTGGTTCAGTCTTCAATGGATTCTTGATCAATTCCCAAAGTGGTTCCCTGTAAAGAGGGAGACCTATCTGGAAAGGCTGTCCTTAAGGCAAATTTGGGCCATAGCTAAGTACGAGAAAGATGGCGAGCCTTCACAGCTTTCTGCAATAGATATATTTGTGACTACATTAGACCCATTGGAGGAACCTCCTCTGGTCACTGCAAACACAGTTCTTTCCATTCTTGCACTGGATTACCCTCCTGAAAAGCTGTCATGCTATCTCTCTGATGATGGTGCTGCTATGTTAACATTCGAGGCCTTATCTGAAACTTCTGAATTTGCAAGGAAATGGGTTCCTTTCTGTAAGAAGTTCAACATTGAGCCTAGGGCTCCTGAATGGTATTTTGCAGAGAAGATAAACTACTTGAAAGATAAAGCACACCCTTCGTTTGTGAAAGAGAGAAGAGCTATGAAGAGAGAGTACGAAGAGTTTAGAGTTCGAATCAATTCTTTAGTTGCAAAAGCTCGAAAAGTCCCGGAAGAAGGATGGACAATGCTGGATGGAACAGTATGGCCTGGAAATAACGTTCATGACCACCCTGGAATGATCCAAGTATTTCTTGGACAATATGGAGGACACGACATGGATGGAAATGAATTACTTCCACGCCTAGTGTATGTTTCAAGGGAAAAGAGGCCTAAATTTAAACACCATAAAAAAGCAGGAGCATTGAATGCCTTGGTTAGAGTTTCTGCTGTGCTTTCTAATGCACCTTATATTCTAAACTTGGACTTTGATGATTACATTAATAATAGCAAAGCTATTAGAGAAGCAATGTGCTTCATGATGGACCCAATACAAAGCAAAAGGGTATGCTACGTTCAGTTCTCTCAGAGGTTTCACAGTGTTGAAACAAATGACAGATATGGGAATCAAAGTACTGCATTCTTTGATATTAACATGAAAGGCTTGGATGGTATCCAAGGACCTATGTATGTTGGGACAGGATGTGTGTTTAAAAGGCATACACTGTATGGTTTTGATGCTCCAAGAAAAAAGAAGACACCCACCAAGACATGCAATTGCTGGCCAAAGTGGTGTTGCTTAGGAAGGAAGAAGAAGAAGATGACGTGTTCCAAGTTTGACTTGGAGGATAGCAGTCATAGAAAAGTACATGGAGAGGCATCTTTGCAAGAGTGTTCTTTGACGTGTATTGAAGAGGGCACCAAAGGAGTTGAAGGCCAAGTTTTGGCTCCAACCCTTGAGCCAAAATCGTCAAAGAAATTTGGACAATCTCCTGTATTCATTGCATCTAATCTACTAGAGGATGGTAAGACTGTAAAAGATGCTAGCCTTGCATCTCTACTTAAAGAAGCCATCCATGTCATTAGCTGTGGCTATGAGGAGAAGACGGAATGGGGAAAGGAGGTGGGCTGGAGCTATGGTTCAACCACGGAGGACATATTGACAGGCTTTAAAATGCACTGCCATGGATGGAGATCCATATACTGTATCCCAGAAAGGCCTGCATTCAAAGTTTCTGCCTCAAGGAGCCTTTCTGATGGTCTGGCTCAAGTGTTTAGGTGGGCACTTGGATCCACTGAGATATTCTTGAGCAAACACTGCCCTCTCTGGTACGGATATGGAGGAGGATTGAAGTGTCTTGAACGTCTTTCTTACATCAATGCTACAGTCTATCCATGGACATCAATTCCTCTTGTTGCATACTGTACTCTACCTGCTGTTTGCTTGCTTACAGGCAAATTCATTGTTCCTGAGCTCAATAACTTAGCTGGCATGTGGTTTCTCTCACTCTTCATATGCATATTTGCAACAAGCATTCTAGAGATGAGATGGAGTGGAGTGACAATTGATGAGTGGTGGAGAAATGAGCAGTTCTGGGTGATAAGAGGGATTTCAGCACATTTATTTGCAGTGTTCCTAGGACTCTTCAAGGTCATAGCTGGTGTAGATGCAAAGTTCATTGTGAAATCAAAAGCAACAGATGATCATAGTGACAAGGAACTTTCTAACCTATTTACATTGAAGTGGACCACTTTGCTCATCATACCAACCACATTGCTAATTTTGAACCTTATTGCCATTGTTGCTGGTGTCTCATATGCCATCAACAATGGTTTTGAATCTTGGGGACCTCTTTTCGGAAAACTCTTCTTCTCCTTTTGGGTCATTTTTCATCTATATCCTTTCCTTAAGGGTATGTTGGGTAGGCAAAATAGGACTCCCTCCATTGTTCTTGTGTGGTCAATTTTGCTTGCTTCTTTCTTCTCTGTTCTATGGGTGAAAATTGACCCCTTTTTGCCCAAATCAAATGGTCCAATTTTGGAGGAGTGTGGATTGGATTGTGATTAG 3072 0.4229 METHLGLVAGSHNSNELIIINQDGNFSRSEVHELCGQVCQICGDEIEVNADGEVFVACNECAFPVXSARVEGDEEEDDIDDLENEFDFDGGRKQVDDDDIPEKHHAVVPSPMGNQVIALQMQARPMDPSKDLAAYGYGSVAWKERMDMWKQRQDKLCKMREENSKEEYHDNFADDTEFPLMDEARQPLSRKMAIPSSQINPYRIMIIIRLVILGFFFHYRLTHPTHNAFGLWLVAVICELWFSLQWILDQFPKWFPVKRETYLERLSLRQIWAIAKYEKDGEPSQLSAIDIFVTTLDPLEEPPLVTANTVLSILALDYPPEKLSCYLSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAEKINYLKDKAHPSFVKERRAMKREYEEFRVRINSLVAKARKVPEEGWTMLDGTVWPGNNVHDHPGMIQVFLGQYGGHDMDGNELLPRLVYVSREKRPKFKHHKKAGALNALVRVSAVLSNAPYILNLDFDDYINNSKAIREAMCFMMDPIQSKRVCYVQFSQRFHSVETNDRYGNQSTAFFDINMKGLDGIQGPMYVGTGCVFKRHTLYGFDAPRKKKTPTKTCNCWPKWCCLGRKKKKMTCSKFDLEDSSHRKVHGEASLQECSLTCIEEGTKGVEGQVLAPTLEPKSSKKFGQSPVFIASNLLEDGKTVKDASLASLLKEAIHVISCGYEEKTEWGKEVGWSYGSTTEDILTGFKMHCHGWRSIYCIPERPAFKVSASRSLSDGLAQVFRWALGSTEIFLSKHCPLWYGYGGGLKCLERLSYINATVYPWTSIPLVAYCTLPAVCLLTGKFIVPELNNLAGMWFLSLFICIFATSILEMRWSGVTIDEWWRNEQFWVIRGISAHLFAVFLGLFKVIAGVDAKFIVKSKATDDHSDKELSNLFTLKWTTLLIIPTTLLILNLIAIVAGVSYAINNGFESWGPLFGKLFFSFWVIFHLYPFLKGMLGRQNRTPSIVLVWSILLASFFSVLWVKIDPFLPKSNGPILEECGLDCD 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1540 1023 Pfam Cellulose synthase 289 1014 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere07g1540 1023 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 774 IPR029044 -
Dere07g1540 1023 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 185 986 - -
Dere07g1540 1023 Coils Coil 387 407 - -
Dere07g1540 1023 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 446 584 IPR029044 -
Dere07g1540 1023 Pfam Zinc-binding RING-finger 31 66 IPR027934 -
Dere07g1540 1023 SUPERFAMILY RING/U-box 27 80 - -
Dere07g1540 1023 Coils Coil 67 85 - -
Dere07g1540 1023 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 68 IPR013083 -
Dere07g1540 1023 Coils Coil 65 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1540 Dere-ChrDere07 20840007 20850910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1540 1 1022 Glycosyltransferase AT5G09870 59.835 0.0 1341