Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1538 ATGGTTCCTGGTATAGGCTTTTTGGTAGTCTCTCGAAATGTTTGGTCTTTGAATTCAACAAGGGCTCCTGATGTCATATTGCAGCATTTGTATGAAGCACAGATTAGGCTGATTTCAGTTTTTGGTGGGCCACTGTTGGACTTTATAGAGATTTTAGCCTCTAGCAAGTTTGATGCAGCTGCACCGGATCCTCGGAAGGGAATCAGAAGTGTTCATATACCGATATCAAGTGCATTCCTTTTGCCCAGGTACAACGTATGGTCAATTCAGTACTGTCATTATGATCTAGAAAAGCATATTAAGCTTTCCAGTTATAGCAGTGTCTTTAATAGCAATTCCCAGAGGAGATTACCTTATGAAGATCTTCCTGGGTACCCCATCGAAGGAGTTTCATGCAGCTGCAGACACATGAGGCGACCTAGTATGGGTCCCATGCTTACCTTGTGTGATCCACAGTACGCATTTGATCCAGCAAAACCTTCCACTTTCATGGTGCTGCCCTGTGACTCACAACCTTGTAGTTCCCTGCCCAAACAAGCCTGTGGAAATTCAAATGAGTGCAGGTCTGCTATCATATACTATTTCATGGAGGAATTCGACGACGCTGCCGCTAAAGATATGGAAAGAGGGTACTTGAAAAAGAAAGAACAAGGCGACCTTGACGGCGTACAAAACCTATGTTTGGACGAACATATTCTGCTGTCTCCACCCGCGTCTGTACCAATTAGTACCCGAGGGGCTTATGAGCATTTAATAGTGGGTCGACTTTATGAAATCGATCATTCCAAGCTTCCGTCTAAAGTCCCAGATCATTTAAAGTCGGTTCGTGTTGTTATGCTCAGTGACATGGGAGAGCTTCAGGTGTCACTAAGGTACCCAAGCATGCACTCTCTTCGCACGCAGTTCAGCGACGCAAACTTCGGGAAACCAGACAAAAGGAAGATCCCTGCACTTGACGAGAAGTATGTGATGGGGTCAGAATTCGCTAGTAAAGCGCTATACAGGAGAGTCCCAATGGAGGAATATGCTGAAAAAAGAAACTCATGGAGCTTCTGGGTTAGAACCTCTGATGAAAATGAAACAGATACAAGCCCAGCATTATTAACTGACGAGGCAATGGACCAGGTTTCCAAGAAGGGTTCCTGCTGGTCTCAGCTCAAGTATACCGGCATGATGCAGTGGGGTAAGCGTCGGCCAGTTCGATTCTTAGGTCGGCATGAGAAGAACAAGTTAGAATCTTTATCAGGATCTGTGAAAGACACTGGGGTAGATATAAGGGAACAAGAAGAGAGAGAGGAAAGGACTGAGAGAAAGAGAAAGAAAGGTGAAGAAAGAGAGGCTATGAAGGAAATTTCGTGTGAGGTCAGGACTACCCGTAAAAGTAAGAGAAATCAAAATGAAAATTGCGGGCTGCAAAAATCGAAGAAAGCACAGCATGGCAAGCAGAATCAACTAGTAGCATACAACAAAAGGAAGAGGAAAATTTCAATTGACCGATGGTCTGCCGAGAGGTATAAGTTAGCAGAAGAGAACATGCTGAAGGTAATGAAAGCTAAAGGAGCTGTGTTCGGAAAGCCAATATTGAGGCCAGCATTGAGATCAGAGGCCCGAAAGTTGATAGGTGATACAGGTTTACTGGATCATTTGCTAAAGCACATGGCGGGGAAAGTGGCTCCAGGAGGAACTGAGAGATTTCGGCGACGACACAATGCTGAGGGTGCGATGGAATACTGGCTGGAGAGTGCTGATCTGGTTAATATTAGACGGGAAGCGGGGGTTCAAGATCCTTATTGGACTCCACCGCCTGGATGGATGCCCGGGGATAACCCTTCACAGGATCCCATTTGTGCTAGAGAACTTAGAGAGATCAAGGAAGAAATGTCCAAGTTGAAGCAAGATATGCAGCAGCTGGTATCAAAGAAGAGGGAGGAAGAATTGGCCATTGTGACCTCAGTTAATTCTTGTTTGTCCAAAAATTCAAATTTGGATAACGATGGTCCCTTGGTTTCGATGCAGGGGATGTATAAAGAGTTAGTGAATAAGAAATCCAAAATTGAGGGACAACTTAGAGAGATTTCACTGGCTTTGAGCGACATAGAGGAACAGATGGTGATGTTGAAAACAAGAGGGGAGGAGCCAACATCTGATTCAGTAACGCCCCCAGCGTCATTGCCAGCACCAGGAACAGTACTAGTGGCCGCAGGAATTGGAGGAGAGAAAAAAATGGAGGAGGGACTTAAAAATAAAGAAACGAAATCAGCAGGTGAATTAGAGCGATCAGATGAGGATATACAGGGGAGGCCAGAAAGCAGGACTGCTGCTGAGGACAAGGCAGCAAAAATAGAAAGGCTGAAAAGTGGGTTCCGAATTTGCAAGCCTCAGGGCACCTTTATATGGCCAAAGATGGGTATTATGTCTCCTCAGGATGTGGTCCAGCTAGACGATCACATTGTGGTCCCAACACCATCCTCTGCTTCCTCTTCCTCCACCACCTCGGCTCCCAAGCCCATCGTCCCTGAACCACCTCCGCCTAACCCTTCCTCTTTTGTTAAACCACTAGCAGAGAGACGCCCTGTCAGCACTGCGACTCTAACCCATGTCACCATGTCCTTTTCCCCTTATTTTTCTCCTCCACCATTGGGGACCCCACCTTCCCAAATAGCCGGCACAGTGAACCTCCCTGTAACTCCTCTCATCAACCTCAACGAGGCCCCTCCCAGCTATGACCCTTCGCTATGTAGCACTCTGCCTTACCAACCTTCACTTGCTCCTATGAAACCACATTGCCCAACTGAGGCTGCTGAAAAGGAGGGCGTGGAGGATAGGAACTATGAGCTGCAGAAGGAAAAGGAAGTGGAAAACTCATCGTCCTCCTCCTCAGAGAGAAATGGGTGGTGGAATATAGCCATGGCGGGTGGCCTCCCCTGA 2928 0.4669 MVPGIGFLVVSRNVWSLNSTRAPDVILQHLYEAQIRLISVFGGPLLDFIEILASSKFDAAAPDPRKGIRSVHIPISSAFLLPRYNVWSIQYCHYDLEKHIKLSSYSSVFNSNSQRRLPYEDLPGYPIEGVSCSCRHMRRPSMGPMLTLCDPQYAFDPAKPSTFMVLPCDSQPCSSLPKQACGNSNECRSAIIYYFMEEFDDAAAKDMERGYLKKKEQGDLDGVQNLCLDEHILLSPPASVPISTRGAYEHLIVGRLYEIDHSKLPSKVPDHLKSVRVVMLSDMGELQVSLRYPSMHSLRTQFSDANFGKPDKRKIPALDEKYVMGSEFASKALYRRVPMEEYAEKRNSWSFWVRTSDENETDTSPALLTDEAMDQVSKKGSCWSQLKYTGMMQWGKRRPVRFLGRHEKNKLESLSGSVKDTGVDIREQEEREERTERKRKKGEEREAMKEISCEVRTTRKSKRNQNENCGLQKSKKAQHGKQNQLVAYNKRKRKISIDRWSAERYKLAEENMLKVMKAKGAVFGKPILRPALRSEARKLIGDTGLLDHLLKHMAGKVAPGGTERFRRRHNAEGAMEYWLESADLVNIRREAGVQDPYWTPPPGWMPGDNPSQDPICARELREIKEEMSKLKQDMQQLVSKKREEELAIVTSVNSCLSKNSNLDNDGPLVSMQGMYKELVNKKSKIEGQLREISLALSDIEEQMVMLKTRGEEPTSDSVTPPASLPAPGTVLVAAGIGGEKKMEEGLKNKETKSAGELERSDEDIQGRPESRTAAEDKAAKIERLKSGFRICKPQGTFIWPKMGIMSPQDVVQLDDHIVVPTPSSASSSSTTSAPKPIVPEPPPPNPSSFVKPLAERRPVSTATLTHVTMSFSPYFSPPPLGTPPSQIAGTVNLPVTPLINLNEAPPSYDPSLCSTLPYQPSLAPMKPHCPTEAAEKEGVEDRNYELQKEKEVENSSSSSSERNGWWNIAMAGGLP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1538 975 MobiDBLite consensus disorder prediction 741 777 - -
Dere07g1538 975 PANTHER PROTEIN DYAD 249 866 IPR044221 GO:0007131|GO:0051177|GO:0051321
Dere07g1538 975 Coils Coil 682 702 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 464 482 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 821 847 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 413 482 - -
Dere07g1538 975 Coils Coil 425 446 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 930 956 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 926 975 - -
Dere07g1538 975 Coils Coil 617 647 - -
Dere07g1538 975 MobiDBLite consensus disorder prediction 422 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1538 Dere-ChrDere07 20793905 20802211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1538 489 587 PHD Transcription Factor Family AT5G22260 37.500 3.86e-06 48.9