Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1535 ATGATTCGTTTATTATCAACCGCCTCACCTCGTTTTCTGCCTTTTCCGAAAGCCATAGCTGCAAAACCTTCCCAAGTATTCACTTCTGCCACCTGTTCGACCATATGTCTAGCCCAAGTTAAAGAGGCAGAGGAAGACTCTAATGATCAGTCAAGAGACGCTATTCAAGTTTTTAGGAAATGGGGTTGTAATGATGATGATTTGGCGAAAATTTTCAAACGTAACCCACAATTGCCTAAGGCTGATATTGCCCTACTTCAGTCGAATCTCTCTCTGCTAAGTCGCTTGGGTCTTAACGCACCTGACCTGGTGAAGATCATCAATTGTAGGCCTAGGTTTCTTAGTAGTCGGGTTAATCGTTATTTTGATGAGAGGCTTGCATATCTGAACTCCTTGTTTGAGTCAAAGGAATTGCTGAAGAGAGCCATTGTGACAAACCCTTCACTCTTAACCTACGATTTTAACAACACCATTAAACCTGCCCTTGCACAATACCTTGAGTGGGGTTTAAACAAGGAAGACTTTCTTTCCATGATCTGTTCTCGACCCACGCTTATTTCAAGGTCTTCATTTGATGAGGAGAAGCTGGAATATATACGCAGGACAGGGATTTCCAAGGATTCGAAGATGTATAAATATGTTGTAGTAATCATGGGTATCTCTCGTCTGCAAACAATTCGGGAGAAGATAGAAAATTTTGCCAAATTCGGTTTCTCTGATGACGAGATATTTGAGCTTATTGGGCGGTCTCCTCTTGTCTTGACACTATCAATTGATAAGGTTCAGAGAAATATGACGTTCATATTGAGCACAATGAAGTTTGAAGCTAGACAAGTTCTTGAAAACCCACGTCTCTTGTTTTTAAACCTGGATACCTTGTTGAAGCCACGAGTTCTCCTTATAAGGAAGATACAAGACATGGATTGCAAGTTAAAATTAACTCCACGCTTAATGATTAGTGCTCTGAGGATGAAGGAGCAGACGTTTGTAAAGTCGTTCATTAAGTGCCGTCCCAACGAAGTTGCCATTGAGTTAATGGAGTTTTATGCACAGGCAAAAGAAGTGAAAAGATTAGCAGGATCATCAAAGAAGAAGTGTACTCATACAGGATTTCCATTTTGA 1122 0.4064 MIRLLSTASPRFLPFPKAIAAKPSQVFTSATCSTICLAQVKEAEEDSNDQSRDAIQVFRKWGCNDDDLAKIFKRNPQLPKADIALLQSNLSLLSRLGLNAPDLVKIINCRPRFLSSRVNRYFDERLAYLNSLFESKELLKRAIVTNPSLLTYDFNNTIKPALAQYLEWGLNKEDFLSMICSRPTLISRSSFDEEKLEYIRRTGISKDSKMYKYVVVIMGISRLQTIREKIENFAKFGFSDDEIFELIGRSPLVLTLSIDKVQRNMTFILSTMKFEARQVLENPRLLFLNLDTLLKPRVLLIRKIQDMDCKLKLTPRLMISALRMKEQTFVKSFIKCRPNEVAIELMEFYAQAKEVKRLAGSSKKKCTHTGFPF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1535 373 Gene3D Transcription termination factor 3, mitochondrial 120 342 IPR038538 -
Dere07g1535 373 SMART mt_12 176 205 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 FunFam Mitochondrial transcription termination factor family protein 122 343 - -
Dere07g1535 373 PANTHER CGI-12 PROTEIN-RELATED 37 336 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 Pfam mTERF 55 135 IPR003690 GO:0003690|GO:0006355
Dere07g1535 373 Pfam mTERF 127 329 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1535 Dere-ChrDere07 20775576 20776697 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere07g1535 mTERF 8.3e-32 No_clan