Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1529 ATGGTCCCTAGTGTGAAGCCAGCTTCTTCCATCAAATGTCTCATAACTTTGGTGGTCTTGCTTTGCGTCTTTGAGATGTTCATCAATGGCTTCAACTTTAACCCTAAACACTTGAACTTGTCGGAGAGGAGCACTCACTGGTCTTCTGCAGGAGCCACCTGGTATGGAGCCCCAAATGGTGCTGGAAGTGATGGAGGAGCATGTGGATATGGGAAGATAGTGTCAGAGCCACCATTCTCTTCCATGGTCACAGGAATAGGCCCTTCTCTTTATCAATCAGGCAAAGAATGTGGAGCCTGTTATGAGGTCAATTGCACAAAACATGCATGGTGCTCTGGAAAACCAGTGAGGGTAGTGATAACATATTCATGTCCAGGAGGCCCTTGTGCTTCTGCACATTTTGATATGAGTATTTGGTGCCATGGCGGTTCATGGTTGGGAAGAAGAACTTCGTCGTGCCGGCATCCTCGAAATCCATTACGCTCGGTATAA 492 0.4715 MVPSVKPASSIKCLITLVVLLCVFEMFINGFNFNPKHLNLSERSTHWSSAGATWYGAPNGAGSDGGACGYGKIVSEPPFSSMVTGIGPSLYQSGKECGACYEVNCTKHAWCSGKPVRVVITYSCPGGPCASAHFDMSIWCHGGSWLGRRTSSCRHPRNPLRSV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1529 163 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Dere07g1529 163 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Dere07g1529 163 PRINTS Expansin/Lol pI family signature 46 61 IPR007118 GO:0005576
Dere07g1529 163 SUPERFAMILY Barwin-like endoglucanases 44 138 IPR036908 -
Dere07g1529 163 Gene3D - 32 146 IPR036908 -
Dere07g1529 163 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 65 137 IPR007112 -
Dere07g1529 163 Pfam Lytic transglycolase 88 137 IPR009009 -
Dere07g1529 163 PANTHER EXPANSIN-B3 21 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1529 Dere-ChrDere07 20671045 20673900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1529 33 155 Expansin Gene Family AT1G65680 53.175 3.15e-39 132