Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1526 ATGGTCACTAGTGTGAAGCCAGCTTCTTCCATCAAATGTCTCATAACTTTGGTGGTCTTGCTTTGCTTCTTTGAGATGTTCATCAATGGCTTCAACTTCAACCCTAAACACTTGAACTTGTCGGAGAGGAGCACTCATAGGTCTTCTGCAGGAGCCACCTGGTATGGAGCCCCAAATGGTGCTGGAAGTGATGGAGGAGCATGTGGATATGGGAAGATAGCGTCAGAGCCACCATTCTCTTCCATGGTCACAGGAATAGGCCCTTCTCTTTATCAATCAGGCAAAGAATGTGGAGCCTGTTATGAGGTCAATTGCACAAAACATGCATGGTGCTCTGGAAAACCAGTGAGGATAGTGATAACATATTCATGTCCAGGAGGCCCTTGTGCTTCAGAATCTGCACATTTTGATCTGAGTGGAACTGCACTTGGTGCCATGGCGGTTCATGGTTGGGAAGAAGAACTCCGTCGTGCTAGCATCCTCGAAATCCATTACGCTGGAGTAGGAAGAGGGAGATGGCGATCTTGGCAGTGTTGCCCTAATGGAGACCTCCAAGGAGAAGCATTCATAGCGAGCCATGCAGCAATCATCGGGTGCAATTTGGAAGCTCGATGCTGTCTCAGATGTTCAAGCTCCTATGAGTATAAGGCTTACCTCTCGTTATTCAGGGAAAACCCTAATAGCATAAAATGTTATGCCAAAGGGGTGGAAGCCTGGTTCAACCTATAG 729 0.4733 MVTSVKPASSIKCLITLVVLLCFFEMFINGFNFNPKHLNLSERSTHRSSAGATWYGAPNGAGSDGGACGYGKIASEPPFSSMVTGIGPSLYQSGKECGACYEVNCTKHAWCSGKPVRIVITYSCPGGPCASESAHFDLSGTALGAMAVHGWEEELRRASILEIHYAGVGRGRWRSWQCCPNGDLQGEAFIASHAAIIGCNLEARCCLRCSSSYEYKAYLSLFRENPNSIKCYAKGVEAWFNL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1526 242 Gene3D - 32 169 IPR036908 -
Dere07g1526 242 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Dere07g1526 242 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Dere07g1526 242 PRINTS Expansin/Lol pI family signature 46 61 IPR007118 GO:0005576
Dere07g1526 242 SMART dpbb_1 83 165 IPR007112 -
Dere07g1526 242 SUPERFAMILY Barwin-like endoglucanases 46 170 IPR036908 -
Dere07g1526 242 PANTHER EXPANSIN-B3 21 168 - -
Dere07g1526 242 Pfam Lytic transglycolase 88 149 IPR009009 -
Dere07g1526 242 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 65 168 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1526 Dere-ChrDere07 20548334 20552664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1526 33 168 Expansin Gene Family AT1G65680 56.115 3.85e-48 158