Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1516 ATGGTCACTAGTGTGAAGCCAGCTTCTTCCATCAAATGTCTCATAACTTTGGTGGTCTTGCTTTGCTTCTTTGAGATGTTCATCAATGGCTTCAACTTCAACCCTAAACACTTGAACTTGTCGGAGAGGAGCACTCACTGGTCTTCTGCAGGAGCCACCTGGTATGGAGCCCCAAATGGTGCTGGAAGTGATGGAGGAGCATGTGGATATGGGAAGATAGCATCAGAGCCACCATTCTCTTCCATGGTCACAGGAATAGGCCCTTCTCTTTATCAATCAGGCAAAGAATGTGGAGCCTGTTATGAGGTCAATTGCACAAAACATGCATGGTGCTCTGGAAAACCAGTGAGGGTAGTGATAACATATTCATGTCCAGGAGGCCCTTGTGCTTCAGAATCTGCACATTTTGATCTGAGTGGAACTGCATTTGGTGCCACGGCGGTTCATGGTTGGGAAGAAGAACTCCGTCGTGCTGGCATCCTCGAAATCCATTACGCTCGAGTAGGAAGAGGGAGATGGCGATCTTGGCAGTGTTGCCCTAATGGAGACCTCCAAGGAGAAGCATTCATAGCGAGCCATGCAGCAATCATCGGGTGCAATTTGGAAGCTCGATGCTGTCTCAGATGTTCAAGCTCCTATGAGTATAAGGCTTACCTCTCGTTATTCAGGGAAAACCCTAATAGCATAAAATGTTATGCCAAAGGGGTGGAAGCCTGGTTCAACCTATAG 729 0.476 MVTSVKPASSIKCLITLVVLLCFFEMFINGFNFNPKHLNLSERSTHWSSAGATWYGAPNGAGSDGGACGYGKIASEPPFSSMVTGIGPSLYQSGKECGACYEVNCTKHAWCSGKPVRVVITYSCPGGPCASESAHFDLSGTAFGATAVHGWEEELRRAGILEIHYARVGRGRWRSWQCCPNGDLQGEAFIASHAAIIGCNLEARCCLRCSSSYEYKAYLSLFRENPNSIKCYAKGVEAWFNL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1516 242 Gene3D - 32 169 IPR036908 -
Dere07g1516 242 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 65 168 IPR007112 -
Dere07g1516 242 PRINTS Expansin/Lol pI family signature 46 61 IPR007118 GO:0005576
Dere07g1516 242 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Dere07g1516 242 PRINTS Expansin/Lol pI family signature 158 174 IPR007118 GO:0005576
Dere07g1516 242 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Dere07g1516 242 SMART dpbb_1 83 165 IPR007112 -
Dere07g1516 242 SUPERFAMILY Barwin-like endoglucanases 44 171 IPR036908 -
Dere07g1516 242 PANTHER EXPANSIN-B3 21 168 - -
Dere07g1516 242 Pfam Lytic transglycolase 88 165 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1516 Dere-ChrDere07 20306701 20311030 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1516 33 168 Expansin Gene Family AT1G65680 58.273 4.84e-51 166