Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1515 ATGGGGACATATTCTGGAAGGGGGGAGCTTCAAGAGGAGACTGAGAAATATGTAGAATGCCTTGCAGCTTCAGGAAGTAGCTACTGGAAAGTAGACAACATTCCTGAGCCTTTAAGCATCAATGTTGCAGCCTTTGAGAAGCCTTTGTGTAAGCTCACATTTCGTCATCTTCTTAAAGCTACCAATGGTTTCAGTGCTCAGAGCTTGATAGGGTCTGGAGGGTTTGGTGAAGTGTACAAAGCTAAGCCCAAAGATGGGTGTGTCATAGCTAGAAAGATGCTTATTTACATTACAGGTTGTCAGGGAGAAAGGGAGTTCATGGCAGAAATGGAAACTTTAGGAAAGATCAAGCATCGAAACCTTGTCACTCTTCTAGATTACTGCAAGATAAGAAAGGAGAGGCTTCTTGTGTACAAGTACATAAAGCTAGGGAGTTTGAAGTTTGCTCTTCATGACAATGAAGGAGAAGGAAGGTGGCTGGAGATTGTGAACAACAATGGACCAAGTGGGAACCGAAAGAGGGAGAAGGAGAAGAAGAAGAAGAAGAGGAGGAGAAGAAATGGTCTCCTCTATTCTGAGCACCATAGGTAG 591 0.4365 MGTYSGRGELQEETEKYVECLAASGSSYWKVDNIPEPLSINVAAFEKPLCKLTFRHLLKATNGFSAQSLIGSGGFGEVYKAKPKDGCVIARKMLIYITGCQGEREFMAEMETLGKIKHRNLVTLLDYCKIRKERLLVYKYIKLGSLKFALHDNEGEGRWLEIVNNNGPSGNRKREKEKKKKKRRRRNGLLYSEHHR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1515 196 MobiDBLite consensus disorder prediction 164 196 - -
Dere07g1515 196 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Dere07g1515 196 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 161 - -
Dere07g1515 196 MobiDBLite consensus disorder prediction 174 196 - -
Dere07g1515 196 SUPERFAMILY Protein kinase-like (PK-like) 39 156 IPR011009 -
Dere07g1515 196 Gene3D Phosphorylase Kinase; domain 1 26 140 - -
Dere07g1515 196 FunFam serine/threonine-protein kinase BRI1-like 2 25 140 - -
Dere07g1515 196 ProSiteProfiles Protein kinase domain profile. 64 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1515 196 Pfam Protein tyrosine and serine/threonine kinase 67 156 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1515 Dere-ChrDere07 20285518 20286287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1515 11 156 Receptor kinase-like Gene Family AT1G55610 66.438 4.47e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dere07g1515 PK_Tyr_Ser-Thr 8.1e-13 CL0016