Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1506 ATGGATACAATTCAGGATAAGACAGAAGAAGATATTAAATTGCAGCATTCCTCATCTTCGGTTGTTGCTGTAGCTATCAAGGGTAACAAGAAAAGCAAATATGTATTACAGTGGGCACTTAAGAAGTTTGTTCCTGAAGGAAGGATTATGTTCAAGCTGGTACATGTCCATGCTGGTATAAAAGGAGTTCCAACACCAATGGGAAATGTCATCCCTATTTCACAAGTGCGTAGTGATGTTGCAGATGCTTTCAGAAAGGAAGTTGAGTGCCAGAGAAGTCAAATGCTTCTACCCTTTAAGAAAATGTGTGACCAGAGAAAGGTGTATGTAGATATAGTGTTTATTGAATCTGATGATGTGGCAGCTGCAATGGCAGAAGAAATTGCCAAGGGTCCCATAACCAAACTTGTTATTGGAGCATCATCTCGTAGCATATTTTCTAGCAAGCCTAAGGGTATGGCTGCAAAGATATCTGCTCGCACTCCAAGATTTTGTACAGTTTATGCAATTTCCAAAGGTAAATTATCTTCCGTACGGCCATCAGACATACAGATTGATGAGAGCTTTGTTGGTGACAGTAGTGAAAACAGTTGTTCCACCTCCTGCTCATCAAATTACACTTCCAACTCTCAGACAGACTCTGGCTCAGTTGCTTCATATGCTCCTTTAAATTCCTCTTTAACGACACAGAGATTTCAAGCTCTTTCAGCTATTAATCAGACTGTCCTAAGCACAAATCCTAGTTTTATTGAATCTAACCATTGTAGATGCCAGTCTCTTGATCTTGGGACAGAGAATAACGCTACAAGTTTGTCTCTGAGGAATTCTAGTATTGGCTGTGGTTTGAGTCGGGTATCAAGTTGCAAAAGCAACAAATCAGAAACTGAATCTATGCTTTATGATCAAAGTTCCACCATAGATATGTCAACGACAACTGAATCTCCTTCATTGAGTAGCCAGGCAAATATTAACCTTGAGCTGGAAAAGTTGAGGATTGAACTAAGACATGCCCAAGGAATGCATGCAATAGCTCAAAGTGAGAACATTGATGCATCACTTAAGCTGAACGATCTAAATAAGAGACAATCAGAGGAATTAATGAAACTCAAGGAGATTATTGCTAAGGAAGAGTTGGCAGAGGAATCAGCAAGGCAAGAGAGAGAGAAATATGAAGCTGCAAAAAGAGAAGCTGATTATTTGAAAGAATGTGCTGAAAGAGAAGCGGCAGATAGAAGAGATATGGAGATGAAAGCTGTTCATGCTGCAAAAGAGAAGGAAAAGCTAGAGTCTGCTCTTAGTGGTTCCATGCCCCAGTTCCATAAGTTTACATGGGATGAAATAGTGTCTGCTACCTCAAATTTCTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGTATGGTGTACAAGTGCACTTTGCATCATACTGTTGTAGCTGTTAAGGTACTCCACTCCAAAGGGAGCCACAAAAGCAAGCAATTCCAGCAGGAGCTAGAAATCTTGTCCAGAATTCGTCATCCAAATTTGCTGCTCCTTCTTGGTGCATGTCCTGATAATGGGTGCCTTGTATATGAATATATGGAGAACGGTAGCTTGGAGGACAGGTTATTTCGGAAGAACAGTACTGCCCCAATTCCTTGGTATGAGAGGTACCGAATTGCATGGGAAGTAGCCTCAGCTCTTTCCTTTCTTCACAGCTCAAAGCCAACACCTATCATCCATCGTGATTTGAAACCGGCAAACATTTTGCTGGACAGTAACTTAGTGAGCAAGATTGGTGATGTTGGCCTTTCTACAATGCTTGATATGGATGCCTTGTCTACCATGTACAAAGACACTGCGCCTGTTGGGACACTCTGCTACATAGATCCTGAGTATCAAAGGACCGGGTTAATATCTCCAAAATCTGATGTGTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCTATTGCACTTACTCATGTGGTAGAAACAGCCATTGCTGATGGGAAATTAGCAGATATATTGGATCCAGAGGCAGGAAGCTGGCCACTTCAGGGGACACTAGACTTAGCTCAATTAGGCCTGAGCTGTACTGAACTCCGGCGTAGAGACCGACCGAATTTAGATGATCGTGTGCTCCCTGCACTAGAAAGGTTGAAAGAAGTTGCTGATCGAGCCCGTGGTTCCAGTTCAATTGTGAAATCCAAACCTCCCAATCATTTTGTCTGCCCAATACTTCAGGATGTTATGGAAGATCCTTATGTTGCTGCGGATGGATACACATATGATCGCAAAGCAATCGAAACATGGTTTGAAGAGAATGACAAATCTCCGATGACAAATATGGTACTTCCTCATAAGAATCTAATTCCTAATTACACACTTTTATCAGCAATTGTGGAGTGGAAGTCTGGAGGAATATGA 2421 0.4151 MDTIQDKTEEDIKLQHSSSSVVAVAIKGNKKSKYVLQWALKKFVPEGRIMFKLVHVHAGIKGVPTPMGNVIPISQVRSDVADAFRKEVECQRSQMLLPFKKMCDQRKVYVDIVFIESDDVAAAMAEEIAKGPITKLVIGASSRSIFSSKPKGMAAKISARTPRFCTVYAISKGKLSSVRPSDIQIDESFVGDSSENSCSTSCSSNYTSNSQTDSGSVASYAPLNSSLTTQRFQALSAINQTVLSTNPSFIESNHCRCQSLDLGTENNATSLSLRNSSIGCGLSRVSSCKSNKSETESMLYDQSSTIDMSTTTESPSLSSQANINLELEKLRIELRHAQGMHAIAQSENIDASLKLNDLNKRQSEELMKLKEIIAKEELAEESARQEREKYEAAKREADYLKECAEREAADRRDMEMKAVHAAKEKEKLESALSGSMPQFHKFTWDEIVSATSNFSEDLRIGMGAYGMVYKCTLHHTVVAVKVLHSKGSHKSKQFQQELEILSRIRHPNLLLLLGACPDNGCLVYEYMENGSLEDRLFRKNSTAPIPWYERYRIAWEVASALSFLHSSKPTPIIHRDLKPANILLDSNLVSKIGDVGLSTMLDMDALSTMYKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTHVVETAIADGKLADILDPEAGSWPLQGTLDLAQLGLSCTELRRRDRPNLDDRVLPALERLKEVADRARGSSSIVKSKPPNHFVCPILQDVMEDPYVAADGYTYDRKAIETWFEENDKSPMTNMVLPHKNLIPNYTLLSAIVEWKSGGI 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1506 806 ProSitePatterns Protein kinases ATP-binding region signature. 460 481 IPR017441 GO:0005524
Dere07g1506 806 ProSiteProfiles Protein kinase domain profile. 454 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1506 806 Coils Coil 327 347 - -
Dere07g1506 806 ProSiteProfiles U-box domain profile. 735 806 IPR003613 GO:0004842|GO:0016567
Dere07g1506 806 SUPERFAMILY RING/U-box 726 802 - -
Dere07g1506 806 CDD STKc_IRAK 460 718 - -
Dere07g1506 806 CDD STK_N 21 173 - -
Dere07g1506 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Dere07g1506 806 Gene3D Phosphorylase Kinase; domain 1 422 526 - -
Dere07g1506 806 CDD RING-Ubox_WDSUB1-like 737 791 - -
Dere07g1506 806 Gene3D HUPs 7 149 IPR014729 -
Dere07g1506 806 SMART Ubox_2 739 801 IPR003613 GO:0004842|GO:0016567
Dere07g1506 806 Gene3D Transferase(Phosphotransferase) domain 1 527 734 - -
Dere07g1506 806 PANTHER OS02G0152300 PROTEIN 21 799 - -
Dere07g1506 806 Pfam Protein tyrosine and serine/threonine kinase 459 707 IPR001245 GO:0004672|GO:0006468
Dere07g1506 806 SMART serkin_6 454 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1506 806 Pfam U-box domain 737 802 IPR003613 GO:0004842|GO:0016567
Dere07g1506 806 SUPERFAMILY Protein kinase-like (PK-like) 435 709 IPR011009 -
Dere07g1506 806 Coils Coil 411 431 - -
Dere07g1506 806 Coils Coil 359 407 - -
Dere07g1506 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 735 804 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1506 Dere-ChrDere07 19982001 19988100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1506 19 803 U-box Gene Family AT4G25160 53.236 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere07g1506 PK_Tyr_Ser-Thr 1.2e-39 CL0016