Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1491 ATGAATGCCCCGATAATTGATCCATTGCAGGGGGATTTTCCCGAAGTCATAGAGGAATATTTGGAGCATGGGTGTATGAAGTGTATTGCCTTCAATCGTCGTGGTACCCTTCTTGCTGCTGGGTGCAATGATGGAAGTTGCATTATATGGGACTTTGAAACCAGGGGCATTGCTAAGGAGCTTCGTGATAATGAGTGCTCTTCTCCCATACTCAGTATCTGTTGGTCGAAGTATGGCCATCGAATTCTTGTATCTGCTGCTGATAAATCATTAACATTGTGGGATGTTATGAGTGCTAAGAAGATAAATCGAATAGTTTTACAACAAACCCCTATACAAGCACGCCTTCATCCAGGTTCCTCTACCCCATCCGTCTGCTTGGCGTGCCCCCTCTCATGTGCTCCAATGATTGTCAACTTGAACACGGGAAACACAACTTCATTTAAAGTTTCTATACCAGACATATGCAATGGTGGGCCCACCCCTCCATCACGCAACAAGTGCTCTGATGCAAACACCTCCTACACACCAACTGCTGCGTGCTTTAATAAGTGCGGAGATCTGGTTTATGTGGGGAATTCAAAAGGAGAAATTCTAATATTTGATTACAAAGACAGTGAAGTGCGTGCCCTAGTTCCTATCTCTGGTGCTTCTGTAGTCAAGAATATAGTGTTCAGTAGGAATGGGCAGTATCTGCTCACAAATTCAAATGATCGAATAATCAGAATATACGAAAACCTACTGCCTTTGAAAGATGGAGTTAGAGCCCTTGATGATCTAGGTGAGAGCCTCAATGATCTTACTGGTGTTAAGAAGTTGAAGGCTGTTGGATCAAAGTGTTTATCTCTATTCCGGGATTTTCAAGATTCCATCACAAAGGTGCACTGGAAAGCACCTTGTTTTAGTGGCGATGGTGAGTGGGTAGTTGGTGGTTCTGCTAGCAAAGGGGAGCACAAGATTTACATATGGGACAGAGCTGGGCATCTTGTGAAAATCCTTGAAGGACCTAAAGAAGCCCTTATTGATTTAGCATGGCATCCTATTCATCCCATTGTTGTATCTGTTTCCCTGGCTGGCTTAGTTTATATCTGGGCTAAAGATTATACTGAGAACTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTTGAGGAAAATGAGGAGTACATTGAGCGCGAAGATGAATTTGATTTGATTCCAGAGACTGAGAAGGTGAAAGTATGGGATGTTAATGAAGATGAGGAAGTTGATATTGAGACTGTGGAGAAAGATGCTGCTTTTAGTGATTCTGATATGTCTCAAGAAGAGCTATGTTTCTTGCCAGCAACTCCTAGTCGCGATGCTCCTGAACAACAAGACAAGTGTGTGGAAAGTTCTTCAAAGCAGGTGGACAGTAATAATTCTGGATCCCCACTTTCGGAAGAGGCTGGACCTAATGGTCATTTGATTAATCATTCATCAAGTCCACTTGAAGATGATGCAGGGGGAACAAGGATGAAGAGAAAGCGAAAGCCTTCAGAGAAGGGGTTGGAGTTGCAGGCAGAGAAAGTGAAGAAACCCTCAAAAAACAATTCACTTCGAGTCAAAGTTAACCATATTGTAGAAAGGTGCCTCATGTGGAATTTTATTCTAGAATGGGTCTATTATGAAGGTAACGTATTCTCCTCATGTCATTTGAGGTAA 1680 0.4268 MNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGCNDGSCIIWDFETRGIAKELRDNECSSPILSICWSKYGHRILVSAADKSLTLWDVMSAKKINRIVLQQTPIQARLHPGSSTPSVCLACPLSCAPMIVNLNTGNTTSFKVSIPDICNGGPTPPSRNKCSDANTSYTPTAACFNKCGDLVYVGNSKGEILIFDYKDSEVRALVPISGASVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKDGVRALDDLGESLNDLTGVKKLKAVGSKCLSLFRDFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPIHPIVVSVSLAGLVYIWAKDYTENWSAFAPDFKELEENEEYIEREDEFDLIPETEKVKVWDVNEDEEVDIETVEKDAAFSDSDMSQEELCFLPATPSRDAPEQQDKCVESSSKQVDSNNSGSPLSEEAGPNGHLINHSSSPLEDDAGGTRMKRKRKPSEKGLELQAEKVKKPSKNNSLRVKVNHIVERCLMWNFILEWVYYEGNVFSSCHLR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1491 559 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 5 510 IPR037850 GO:0048188
Dere07g1491 559 Gene3D - 138 435 IPR015943 GO:0005515
Dere07g1491 559 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Dere07g1491 559 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 104 IPR001680 GO:0005515
Dere07g1491 559 Pfam WD domain, G-beta repeat 280 324 IPR001680 GO:0005515
Dere07g1491 559 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Dere07g1491 559 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Dere07g1491 559 MobiDBLite consensus disorder prediction 442 521 - -
Dere07g1491 559 SUPERFAMILY WD40 repeat-like 23 364 IPR036322 GO:0005515
Dere07g1491 559 FunFam Compass component swd1 164 424 - -
Dere07g1491 559 Gene3D - 20 122 IPR015943 GO:0005515
Dere07g1491 559 SMART WD40_4 277 324 IPR001680 GO:0005515
Dere07g1491 559 SMART WD40_4 162 202 IPR001680 GO:0005515
Dere07g1491 559 SMART WD40_4 54 95 IPR001680 GO:0005515
Dere07g1491 559 SMART WD40_4 204 245 IPR001680 GO:0005515
Dere07g1491 559 SMART WD40_4 326 365 IPR001680 GO:0005515
Dere07g1491 559 SMART WD40_4 13 51 IPR001680 GO:0005515
Dere07g1491 559 MobiDBLite consensus disorder prediction 493 521 - -
Dere07g1491 559 MobiDBLite consensus disorder prediction 454 485 - -
Dere07g1491 559 FunFam Retinoblastoma-binding-like protein E 18 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1491 Dere-ChrDere07 19806722 19812304 Dispersed