Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1489 ATGAAGACAGCGATGGCGATGGCTAGAGCAGTTTTCCATTCACATCTCCTCGTCTTGCTCTTCTTTCTCGCCATCCGTCTCTCACATCAGTTACAATATTCTCAGTCTCAGACCCTTCTGAAATTTCAGAAGCTTCTTGGATACCCATCAGCTCTAAGCAGCTTCACAACCATCGTAGACTTCTGCAACATCGAACCCACCACCTATTTGACGATAGTCTGCTATGAGGACAACATAACGCAGCTTCATGTTGTTGGCAACAATGGGATTTCCCCTTTGCCTCAAAATTTCTCTTCAGACTCTCTATTTGTTACTTTGGGTACTATATCCAGCTTGAAAGTCCTTTCTTTGGTTTCTATGGGTCTCTGGGGTCCGATACCTGAAAGCATTTCTCAGTTGCCCTCTCTGGAAATTCTCAACATTAGCTCAAATTACTTCAGTGGAGCCATCCCAACCCAACTTTCTCTTCTTAAGAATCTGCAATCGTTGGTTCTTGATGATAACGATTTTACGGGTGAAATTCCCATGTGGGTTGGTTCGCTTCAAGGTCTGGCTGTGTTGAGTATGAGGAAAAATTTGCTTACTGGGTCTGTGCCAACTTCTGTGAATGCTCTGCAAACTCTGAGGGTACTGGATCTATCAAATAATCAATTACGTGGTGAACTACCTGACTTTCTCAATTTGAAAAATCTCCAAGTTCTTCATTTGGAAAACAACACATTTGGACCCCATTTTCCTTCTCTACCCTCCAAGTTAGTTTCCCTGGTGCTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCCTATTACCAGCTTCAAAAGCTGGACCTTTCAGTGAATGAATTTGTGGGACCGTTTCTGCCATCTTTACTTTCTTTGCCTTCCATCGAATACCTTGATGTTTCAGCAAATAAATTTACTGGGATGCTATTGAGTAATACTTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTAAAGGGGGAACTTCCCAGTTGTTTGAAACCAAAGAACGGGGTGGCTGTGTCGTATGCAAGAAATTGTTTTCCAAATGTTGATCAAGATCAGCACCCTCCCGACTTCTGCCAAAATGAGGCTCTGGCAGTGACTATTATACCCCATGAACAGAAGCATAGAAGAAGAACAACTGGTAAAGCAGTTCTTGTGTCAAGTATGGGAGGAATTGTTGGAGGAGCCTTGATTTTTGGGGTGGTTTTCTTGTTCATTATTCGAGTAAACAAAAAAGGCGCTGACAAAGTGCCTACAAGGTCCGCATTGGTGCAAGTTATAAGCCAGATGAATGATAAACATGATGAAGCGAAAACACCTACAACTACAAGGTCCATAATGGAGAATATCATCAGTCGTGTGCCTAAGCCTAACAAGGATTCTGTGAAAACACTTGCAAGATCCATGATGGATCATGTTGTTAGCCGGGTTCATAACAAACATCATGTGAGAACCCCTACAAGGTCCATAATAGAGCATGTCTCATCAGTAAACACAGCAAAACTACTCACTGATGCAAGGTATATCTCGCAAACAATGAAGATGGGAACCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGAGGAACTTAAGGAGTCTACAAATAATTTTGATGCATCATGTTTCATAACCGAAGGTTCACGTGGTCAGATCTACAAAGGGATGCTCTCTGACGGAACTCATATTGCTGTTAGAAGTTTGAAAATGAAGAAAAGACATGGTCCTCAGACCTATATGCACCATATTGAGTTGATTTCGAAACTTAGACATTCACACTTGGTCAGTGCTCTTGGACATTGTTTTGAATGCAACCCGGATGATCCAAGTGTCAGCAGTATATTTCTCATATTTGAGTTTGCACCATACAGAAGTTTAAGAGGCTGCATATCTGGATCTTCTGGACAAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGAGTTGGTAAAGGCATTCAATTTTTGCACACTGGGATAGTGCCTGGATTGTATTCAAATAATCTGAAGATAACAGATATTCTTCTGGATAACAATCTTAATGTTAAAATAAGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGATAATGATAGGCAATGGAACTTCTTCATCTGGTGTAAAAGGAAATGTTCAAGCAAGGATAAAGGATGGGGACAAAAATGATGTCTACGATTTTGGGGTAATCTTACTTGAAATAATTCTAGGACGAACAATCATGTTCCATAATGAAGTTGGAACACTAAAAGATCTTTTACAAGTAAGCATAGCAACTGATGACATAGCTAGAAGGAGCATTGTTGATCCAGCAGTTCACAAGGAGTGCTCAGATGAATCATTGAAGACATTGATGGAGATATGTGTGAGGTGTCTCTCAGAAGATCCTACTGATAGGCCTTCTGTGGAAGATGTTCTCTGGAATTTGCAGTTTGCAGCACAGGTTCAGAACTCATGGGGAAGAGACTCCAATGATGCTAGGGAGTCACCTGCTTCATCTTCCCAGGAAAAACAAGGTTCCCAACTTGTATGA 2565 0.4094 MKTAMAMARAVFHSHLLVLLFFLAIRLSHQLQYSQSQTLLKFQKLLGYPSALSSFTTIVDFCNIEPTTYLTIVCYEDNITQLHVVGNNGISPLPQNFSSDSLFVTLGTISSLKVLSLVSMGLWGPIPESISQLPSLEILNISSNYFSGAIPTQLSLLKNLQSLVLDDNDFTGEIPMWVGSLQGLAVLSMRKNLLTGSVPTSVNALQTLRVLDLSNNQLRGELPDFLNLKNLQVLHLENNTFGPHFPSLPSKLVSLVLRNNSFRFGIPSNLSSYYQLQKLDLSVNEFVGPFLPSLLSLPSIEYLDVSANKFTGMLLSNTSCNSDILFVNLSSNLLKGELPSCLKPKNGVAVSYARNCFPNVDQDQHPPDFCQNEALAVTIIPHEQKHRRRTTGKAVLVSSMGGIVGGALIFGVVFLFIIRVNKKGADKVPTRSALVQVISQMNDKHDEAKTPTTTRSIMENIISRVPKPNKDSVKTLARSMMDHVVSRVHNKHHVRTPTRSIIEHVSSVNTAKLLTDARYISQTMKMGTSLPAYRTFALEELKESTNNFDASCFITEGSRGQIYKGMLSDGTHIAVRSLKMKKRHGPQTYMHHIELISKLRHSHLVSALGHCFECNPDDPSVSSIFLIFEFAPYRSLRGCISGSSGQKLSWAQRIAAAIGVGKGIQFLHTGIVPGLYSNNLKITDILLDNNLNVKISSYNLPLLAENKIMIGNGTSSSGVKGNVQARIKDGDKNDVYDFGVILLEIILGRTIMFHNEVGTLKDLLQVSIATDDIARRSIVDPAVHKECSDESLKTLMEICVRCLSEDPTDRPSVEDVLWNLQFAAQVQNSWGRDSNDARESPASSSQEKQGSQLV 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1489 854 Gene3D Phosphorylase Kinase; domain 1 508 630 - -
Dere07g1489 854 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Dere07g1489 854 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 250 375 - -
Dere07g1489 854 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 248 - -
Dere07g1489 854 ProSiteProfiles Protein kinase domain profile. 548 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1489 854 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 66 840 - -
Dere07g1489 854 Gene3D Transferase(Phosphotransferase) domain 1 633 845 - -
Dere07g1489 854 SUPERFAMILY L domain-like 34 339 - -
Dere07g1489 854 SUPERFAMILY Protein kinase-like (PK-like) 526 822 IPR011009 -
Dere07g1489 854 Gene3D Ribonuclease Inhibitor 34 155 IPR032675 -
Dere07g1489 854 Gene3D Ribonuclease Inhibitor 246 362 IPR032675 -
Dere07g1489 854 Pfam Leucine Rich repeats (2 copies) 207 239 IPR025875 -
Dere07g1489 854 MobiDBLite consensus disorder prediction 828 854 - -
Dere07g1489 854 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Dere07g1489 854 Gene3D Ribonuclease Inhibitor 156 245 IPR032675 -
Dere07g1489 854 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 632 836 - -
Dere07g1489 854 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 522 630 - -
Dere07g1489 854 Pfam Protein tyrosine and serine/threonine kinase 554 817 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1489 Dere-ChrDere07 19774505 19779383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1489 484 845 Miscellaneous Gene Families AT3G03770 60.705 2.16e-143 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dere07g1489 PK_Tyr_Ser-Thr 5.4e-18 CL0016