Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1488 ATGACCCACCTTCTCTACCCCTGTCTCACTCCCATTGACCCGCTGTACGCGCTAGTTGAACTGCTTCAACTTAGTTTGGAGCATTGCGGCACCTTTGATCCCATACCCAAGACCTTCCCGCCAGTTCTCTCTGATCTAGCCGAACCAACGCCAAATTCTAGCACTTCTGTAACTTATTTTGCAATGGACTCCGATAATCCAGTTGATAATTTTTCAAATTTTGAATCTGCTGTTAATTCATCGTCACTTAGAAGCGCTATGTCTATTCAGTCTAGGGGCTCTGGTGGGGATTCGACCCGAGAAGTAAATTTCGGGCATTCGGGTTCGAAGACTGAACAGTATGGGTCGAAGGGACCAGATTCTGAAGCACTCAGCACGTCCCAGAAGGAAATCAGTGATGAGGATGCGAGGTTAGTATATATAAATGATCCCGTGGGGACGAATGTGGGGTTTGGATTTGCAGGAAATTCGATTCGTACCACCAAATACTCCATCCTCACCTTTTTGCCCAAAAATTTATTTGAACAATTCCATAGAGTTGCTTACATCTATTTTCTTATAATCGCCATACTTAATCAGCTCCCTCAGATTGCCGTTTTTGGAGTTGGGATTTCTTTTTTGCCGTTAGCCTTTGTCCTGGTAGTTTCTGCTGTGAAGGATGCATATGAGGACTGGAGGCGGCATAAGTCTGACAAAGTTGAGAACAACAGGTTAGCATTAGTTTTGTTTGATGATGGTTTCAAACAGAAAAAGTGGAAGGACATTAGAGTTGGTGAAATCATTAAAATCAATGCAAATGAAACCATTCCTTGTGATATGGTTTTGCTGTCAACCATTGATCCTACTGGAGTTGCATATGTTCAGACTACTAATTTAGATGGAGAGTCTAATTTGAAGACTCGGTATGCAAAACCTGAGACCCTTTCAAAGTTGCCTGAAAAGGAGAGGATTAATGGGTTAATTAAATGTGAGAAACCCAACAGGAACATATATGGGTTTCAGGCTAGCATGGAAATTGATGGAAAGCGATTGTCCCTTGGATCCTCCAATATTATTCTCCGAGGCTGTGAACTCAAGAATACCAATTGGGTAATTGGTGTTGCTGTATATTGTGGCCGTGAAACTAAAGCTATGCTCAATAACTCAGGAGCTCCATCAAAGAGGAGCCGACTGGAGACTCGTATGAACAAGGAGATCATCTTGATCTCTTGCTTTCTTGTAACTTTGTGTACAGTTATCTCTGTTTGCACTGCTGTTTGGTTAAAGCGCAACAAAAATAAATTGGATCTCTTGCCCTATTATCGGAAACTGGACATTTCCACGGGAAAAGAAAAAAGCTATAAGTATTTTGGATGGGGATTGGAAATACTGATCGCATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCCTTGTATATTTCGATGGAGCTTGTCCGGGTTGGTCAGGCCTACTTCATGATTGGAGACACCAGAATGTATGACGGAGCATCAAATTCAAGATTTCAGTGCAGAGCTTTAAATATAAATGAAGATTTAGGTCAAATTAAATATGTTTTCTCAGACAAAACTGGTACGCTTACTGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGAGTTGATTACAGTTCTCAAAAAGACATTCTGGAGAACGAACAAGTTGAATACTCTGACCGAGTTGATGGAAAGGTCCTGAGGCCAAAGATTAAGGTGAAAGTTGATTCAGACCTTCTGCGATTATTAGGAGGTGGATTCAAAAACAAGGAAGCAAAACAGATTCGTGATTTCTTCCTTGTCTTGGCAGCCTGCAATACTATTGTGCCTATTGTTGTTGATACATCTGATCCTGCGGTCAAATTGATTGATTACCAAGGGGAGTCACCAGACGAACAAGCATTGGCATATGGTGCTGCTGCCTATGGTTTTATGCTTATACAACGAACGTCAGGCTACATAGTTATTGATATTCAGGGAGAAAGACAAAAGTTCAACGTCTTGGGTTTGCATGAATTTGACAGTGACCGGAAGAGGATGTCTGTTATATTGGGGTACCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGTGCAGATACATCCATGTTTAGTGTGATAGATAAATCATTGAACATGGATATAATCCGTGCAACTGAAACCCATCTTCACTCTTATTCCTCTGTGGGTTTGAGGACACTTGTAATTGGGATGCGGGAATTAAATCCTTCAGAATTTGAGCAATGGCACTTTGCCTTTGAGGCAGCAAGCAATGCTTTGATTGGTAGGGCTGCTTTACTTCGTAAGGTTTCTAGCAGTGTGGAAAACAATCTCTGCATATTGGGTGCATCTGCTATAGAAGATAAACTGCAGCAAGGGGTGCCAGAATCCATTGAGTCTCTAAGGACAGCAGGTATCAAGGTATGGGTGTTAACCGGGGACAAACAGGAAACTGCCATATCAATTGCATACTCCTCAAAGCTTCTAACAGGCAGTATGACTCAGATTATAATTAATAGCAACAATAGAGAGTCATGTAGGAGGAATTTACAAGATGCCCTTGTAATGTCTAACAAACTAATGACCATGTCTGGGGTCACTAACAGTACTGAAGGAAGTGCTGAACCTGTAACAGCTCAAATAGCCCTGATTATTGATGGTTCCAGTCTTGTACACATTCTTGACAGTGAACTTCAAGAACAGCTCTTTCAACTAGCAAGTAAATGTTCTGTGGTTCTCTGTTGTCGAGTGGCTCCACTGCAAAAGGCTGGGATTGTTTCCCTTGTGAAGAACAGGACGTCTGACCTGACCCTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGGCATCAGATTATGCAATGGGACAATTTAGGTTTATAGTTCCTCTCTTATTGGTACATGGCCATTGGAACTATCAACGGCTGGGTTATATGGTACTCTACAATTTTTATAGGAACGCTATCATTGTTCTTGTCCTATTTTGGTATGTGCTGTTCACTGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTTTGTTGTATTCTGTAGTTTACACTTCATTTCCAACTATTATTGTTGGTATTCTTGACAAAGATCTTAGTAAAAGGACTCTTCTAAAGTATCCTCAGCTTTATGGGGCTGGGCAGAGACAAGAGGCCTACAATGAAAATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGTATTGTAGTGTTCTTTGTTCCTCTCTTTGCATATTGGGAAAGCACTGTTGATATATCCAGCATAGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTACACCTAGCCATGGACGTCATCAGGTGGACTTGGATTACTCATGCAGCCATTTGGGGGTCGGTCATTGCAACCTTCATTTCTGTCATGATTATTGATGCTATACCTTCATTGCCTGGTTACTGGGCCATCTTTCATGCTGCAGGAACTTGGTTGTTCTGGTTATGTTTGCTTGGGACTATTGTGGCTGCTTTGCTTCCTCGTTTTGTTGTAAAATTTGTGCGTCAATTTTACCATCCTGACGATATTCAAATTTTGAGAGCTGAAAAAACGTTTGCGAATACAAGAGTGGTTCAAGGTGGGCAGATAGAAATGCATCCTATTAGAGATGGTCCAACTACCTAA 3732 0.414 MTHLLYPCLTPIDPLYALVELLQLSLEHCGTFDPIPKTFPPVLSDLAEPTPNSSTSVTYFAMDSDNPVDNFSNFESAVNSSSLRSAMSIQSRGSGGDSTREVNFGHSGSKTEQYGSKGPDSEALSTSQKEISDEDARLVYINDPVGTNVGFGFAGNSIRTTKYSILTFLPKNLFEQFHRVAYIYFLIIAILNQLPQIAVFGVGISFLPLAFVLVVSAVKDAYEDWRRHKSDKVENNRLALVLFDDGFKQKKWKDIRVGEIIKINANETIPCDMVLLSTIDPTGVAYVQTTNLDGESNLKTRYAKPETLSKLPEKERINGLIKCEKPNRNIYGFQASMEIDGKRLSLGSSNIILRGCELKNTNWVIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNKEIILISCFLVTLCTVISVCTAVWLKRNKNKLDLLPYYRKLDISTGKEKSYKYFGWGLEILIAFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDTRMYDGASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSQKDILENEQVEYSDRVDGKVLRPKIKVKVDSDLLRLLGGGFKNKEAKQIRDFFLVLAACNTIVPIVVDTSDPAVKLIDYQGESPDEQALAYGAAAYGFMLIQRTSGYIVIDIQGERQKFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMFSVIDKSLNMDIIRATETHLHSYSSVGLRTLVIGMRELNPSEFEQWHFAFEAASNALIGRAALLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIAYSSKLLTGSMTQIIINSNNRESCRRNLQDALVMSNKLMTMSGVTNSTEGSAEPVTAQIALIIDGSSLVHILDSELQEQLFQLASKCSVVLCCRVAPLQKAGIVSLVKNRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDYAMGQFRFIVPLLLVHGHWNYQRLGYMVLYNFYRNAIIVLVLFWYVLFTAFTLTTAITEWSSLLYSVVYTSFPTIIVGILDKDLSKRTLLKYPQLYGAGQRQEAYNENLFWLTMADTLWQSIVVFFVPLFAYWESTVDISSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSVIATFISVMIIDAIPSLPGYWAIFHAAGTWLFWLCLLGTIVAALLPRFVVKFVRQFYHPDDIQILRAEKTFANTRVVQGGQIEMHPIRDGPTT 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1488 1243 Pfam Cation transport ATPase (P-type) 632 706 - -
Dere07g1488 1243 SUPERFAMILY Calcium ATPase, transmembrane domain M 155 1209 IPR023298 -
Dere07g1488 1243 Gene3D - 632 757 IPR023299 GO:0000166
Dere07g1488 1243 FunFam Phospholipid-transporting ATPase 782 982 - -
Dere07g1488 1243 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 127 1219 - -
Dere07g1488 1243 Pfam Phospholipid-translocating P-type ATPase C-terminal 970 1209 IPR032630 -
Dere07g1488 1243 ProSitePatterns E1-E2 ATPases phosphorylation site. 525 531 IPR018303 -
Dere07g1488 1243 SUPERFAMILY Calcium ATPase, transduction domain A 236 377 IPR008250 -
Dere07g1488 1243 PRINTS P-type cation-transporting ATPase superfamily signature 523 537 - -
Dere07g1488 1243 PRINTS P-type cation-transporting ATPase superfamily signature 942 961 - -
Dere07g1488 1243 CDD P-type_ATPase_APLT_Dnf-like 155 1102 - -
Dere07g1488 1243 Pfam Phospholipid-translocating ATPase N-terminal 139 201 IPR032631 -
Dere07g1488 1243 SFLD p-type atpase 507 993 IPR044492 -
Dere07g1488 1243 Gene3D - 209 380 - -
Dere07g1488 1243 SUPERFAMILY HAD-like 510 982 IPR036412 -
Dere07g1488 1243 MobiDBLite consensus disorder prediction 88 126 - -
Dere07g1488 1243 PRINTS Sodium/potassium-transporting ATPase signature 516 537 - -
Dere07g1488 1243 PRINTS Sodium/potassium-transporting ATPase signature 1019 1039 - -
Dere07g1488 1243 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 529 795 IPR023299 GO:0000166
Dere07g1488 1243 MobiDBLite consensus disorder prediction 88 130 - -
Dere07g1488 1243 SFLD Haloacid Dehalogenase 507 993 - -
Dere07g1488 1243 FunFam Phospholipid-transporting ATPase 627 760 - -
Dere07g1488 1243 Pfam E1-E2 ATPase 239 480 - -
Dere07g1488 1243 NCBIfam HAD-IC family P-type ATPase 455 545 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere07g1488 1243 NCBIfam HAD-IC family P-type ATPase 913 1029 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere07g1488 1243 NCBIfam HAD-IC family P-type ATPase 204 306 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere07g1488 1243 Gene3D - 779 982 IPR023214 -
Dere07g1488 1243 FunFam Phospholipid-transporting ATPase 211 380 - -
Dere07g1488 1243 NCBIfam phospholipid-translocating P-type ATPase 153 1216 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1488 Dere-ChrDere07 19764587 19770435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1488 87 1241 Primary Pumps ATPases AT5G04930 68.453 0.0 1665